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British Journal of Cancer|March 26, 2021
Proteogenomics drives therapeutic hypothesis generation for precision oncologyJonathan T Lei, Bing ZhangNature Cancer|December 11, 2024
Mapping the functional network of human cancer through machine learning and pan-cancer proteogenomicsZhiao Shi, Jonathan T Lei, John M Elizarraras, et al.Cell Systems|August 24, 2023
A proteogenomics data-driven knowledge base of human cancerYuxing Liao, Sara R Savage, Yongchao Dou, et al.Biorxiv : the Preprint Server for Biology|January 30, 2023
Deep learning prediction boosts phosphoproteomics-based discoveries through improved phosphopeptide identificationXinpei Yi, Bo Wen, Shuyi Ji, et al.Molecular & Cellular Proteomics : MCP|December 28, 2023
Deep Learning Prediction Boosts Phosphoproteomics-Based Discoveries Through Improved Phosphopeptide IdentificationXinpei Yi, Bo Wen, Shuyi Ji, et al.Journal of Leukocyte Biology|May 31, 2008
Separate endocytic pathways regulate IL-5 receptor internalization and signalingJonathan T Lei, Margarita Martinez-MoczygembaNature Methods|August 26, 2025
DeepMVP: deep learning models trained on high-quality data accurately predict PTM sites and variant-induced alterationsBo Wen, Chenwei Wang, Kai Li, et al.Cold Spring Harbor Perspectives in Medicine|May 3, 2023
The Breast Cancer Proteome and Precision OncologyJonathan T Lei, Eric J Jaehnig, Hannah Smith, et al.Molecular & Cellular Oncology|December 8, 2018
ESR1 fusions drive endocrine therapy resistance and metastasis in breast cancerJonathan T Lei, Xuxu Gou, Matthew J EllisThe Journal of Biological Chemistry|October 4, 2011
Three lysine residues in the common β chain of the interleukin-5 receptor are required for Janus kinase (JAK)-dependent receptor ubiquitination, endocytosis, and signalingJonathan T Lei, Tuhina Mazumdar, Margarita Martinez-MoczygembaPageof 485