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Msystems
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August 11, 2022
Reconstruction and Analysis of Thermodynamically Constrained Models Reveal Metabolic Responses of a Deep-Sea Bacterium to Temperature Perturbations
Keith Dufault-Thompson, Chang Nie, Huahua Jian, et al.
Msystems
|
April 7, 2017
A Genome-Scale Model of <i>Shewanella piezotolerans</i> Simulates Mechanisms of Metabolic Diversity and Energy Conservation
Keith Dufault-Thompson, Huahua Jian, Ruixue Cheng, et al.
Gigascience
|
April 22, 2024
Large-scale genomic survey with deep learning-based method reveals strain-level phage specificity determinants
Yiyan Yang, Keith Dufault-Thompson, Wei Yan, et al.
Biorxiv : the Preprint Server for Biology
|
July 28, 2023
Deciphering Phage-Host Specificity Based on the Association of Phage Depolymerases and Bacterial Surface Glycan with Deep Learning
Yiyan Yang, Keith Dufault-Thompson, Wei Yan, et al.
Biorxiv : the Preprint Server for Biology
|
April 16, 2025
Ancestral proteins trace the emergence of substrate specificity and oligomerization within bacterial DEDDy dinucleases
Sofia Mortensen, Andy Burnim, Keith Dufault-Thompson, et al.
Msphere
|
May 13, 2021
Microbiome Analysis Reveals Diversity and Function of <i>Mollicutes</i> Associated with the Eastern Oyster, <i>Crassostrea virginica</i>
Zachary T Pimentel, Keith Dufault-Thompson, Kayla T Russo, et al.
Nature Communications
|
April 14, 2026
SpiR is a gut microbial enzyme that drives cholesterol conversion
Gabriela Arp, Sophia Levy, Angela K Jiang, et al.
Biorxiv : the Preprint Server for Biology
|
August 8, 2025
The Impact of Tokenizer Selection in Genomic Language Models
LeAnn M Lindsey, Nicole L Pershing, Anisa Habib, et al.
Bioinformatics (Oxford, England)
|
August 18, 2025
The Impact of Tokenizer Selection in Genomic Language Models
LeAnn M Lindsey, Nicole L Pershing, Anisa Habib, et al.
Biorxiv : the Preprint Server for Biology
|
January 13, 2025
Gut Bacteria Encode Reductases that Biotransform Steroid Hormones
Gabriela Arp, Angela Jiang, Keith Dufault-Thompson, et al.
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Showing results (11-20 of 30) with videos related to
Sort By:
Page
of 3
Msystems
|
August 11, 2022
Reconstruction and Analysis of Thermodynamically Constrained Models Reveal Metabolic Responses of a Deep-Sea Bacterium to Temperature Perturbations
Keith Dufault-Thompson, Chang Nie, Huahua Jian, et al.
Msystems
|
April 7, 2017
A Genome-Scale Model of <i>Shewanella piezotolerans</i> Simulates Mechanisms of Metabolic Diversity and Energy Conservation
Keith Dufault-Thompson, Huahua Jian, Ruixue Cheng, et al.
Gigascience
|
April 22, 2024
Large-scale genomic survey with deep learning-based method reveals strain-level phage specificity determinants
Yiyan Yang, Keith Dufault-Thompson, Wei Yan, et al.
Biorxiv : the Preprint Server for Biology
|
July 28, 2023
Deciphering Phage-Host Specificity Based on the Association of Phage Depolymerases and Bacterial Surface Glycan with Deep Learning
Yiyan Yang, Keith Dufault-Thompson, Wei Yan, et al.
Biorxiv : the Preprint Server for Biology
|
April 16, 2025
Ancestral proteins trace the emergence of substrate specificity and oligomerization within bacterial DEDDy dinucleases
Sofia Mortensen, Andy Burnim, Keith Dufault-Thompson, et al.
Msphere
|
May 13, 2021
Microbiome Analysis Reveals Diversity and Function of <i>Mollicutes</i> Associated with the Eastern Oyster, <i>Crassostrea virginica</i>
Zachary T Pimentel, Keith Dufault-Thompson, Kayla T Russo, et al.
Nature Communications
|
April 14, 2026
SpiR is a gut microbial enzyme that drives cholesterol conversion
Gabriela Arp, Sophia Levy, Angela K Jiang, et al.
Biorxiv : the Preprint Server for Biology
|
August 8, 2025
The Impact of Tokenizer Selection in Genomic Language Models
LeAnn M Lindsey, Nicole L Pershing, Anisa Habib, et al.
Bioinformatics (Oxford, England)
|
August 18, 2025
The Impact of Tokenizer Selection in Genomic Language Models
LeAnn M Lindsey, Nicole L Pershing, Anisa Habib, et al.
Biorxiv : the Preprint Server for Biology
|
January 13, 2025
Gut Bacteria Encode Reductases that Biotransform Steroid Hormones
Gabriela Arp, Angela Jiang, Keith Dufault-Thompson, et al.
Page
of 3