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International Journal of Molecular Sciences
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February 26, 2022
Application of Homology Modeling by Enhanced Profile-Profile Alignment and Flexible-Fitting Simulation to Cryo-EM Based Structure Determination
Yu Yamamori, Kentaro Tomii
Bioinformatics (Oxford, England)
|
November 28, 2013
Revisiting amino acid substitution matrices for identifying distantly related proteins
Kazunori Yamada, Kentaro Tomii
Methods in Molecular Biology (Clifton, N.J.)
|
July 29, 2025
Exploring Binding Sites on Proteins for Function Prediction Using the PoSSuM Databases
Kentaro Tomii, Kazuyoshi Ikeda
Methods in Molecular Biology (Clifton, N.J.)
|
April 27, 2016
Systematic Exploration of an Efficient Amino Acid Substitution Matrix: MIQS
Kentaro Tomii, Kazunori Yamada
Bioinformatics (Oxford, England)
|
February 7, 2004
FORTE: a profile-profile comparison tool for protein fold recognition
Kentaro Tomii, Yutaka Akiyama
ACS Omega
|
June 16, 2025
Application of Anomaly Detection to Identify Important Features of Protein Dynamics
Yu Yamamori, Kentaro Tomii
Scientific Reports
|
September 1, 2019
Accurate Classification of Biological and non-Biological Interfaces in Protein Crystal Structures using Subtle Covariation Signals
Yoshinori Fukasawa, Kentaro Tomii
Methods (San Diego, Calif.)
|
August 16, 2015
Protein ligand-binding site comparison by a reduced vector representation derived from multidimensional scaling of generalized description of binding sites
Tsukasa Nakamura, Kentaro Tomii
Methods in Molecular Biology (Clifton, N.J.)
|
July 5, 2020
Structural Modeling and Ligand-Binding Prediction for Analysis of Structure-Unknown and Function-Unknown Proteins Using FORTE Alignment and PoSSuM Pocket Search
Yuko Tsuchiya, Kentaro Tomii
BMC Bioinformatics
|
January 11, 2020
DeepECA: an end-to-end learning framework for protein contact prediction from a multiple sequence alignment
Hiroyuki Fukuda, Kentaro Tomii
Page
of 9
Search research articles
Search
Showing results (1-10 of 81) with videos related to
Sort By:
Page
of 9
International Journal of Molecular Sciences
|
February 26, 2022
Application of Homology Modeling by Enhanced Profile-Profile Alignment and Flexible-Fitting Simulation to Cryo-EM Based Structure Determination
Yu Yamamori, Kentaro Tomii
Bioinformatics (Oxford, England)
|
November 28, 2013
Revisiting amino acid substitution matrices for identifying distantly related proteins
Kazunori Yamada, Kentaro Tomii
Methods in Molecular Biology (Clifton, N.J.)
|
July 29, 2025
Exploring Binding Sites on Proteins for Function Prediction Using the PoSSuM Databases
Kentaro Tomii, Kazuyoshi Ikeda
Methods in Molecular Biology (Clifton, N.J.)
|
April 27, 2016
Systematic Exploration of an Efficient Amino Acid Substitution Matrix: MIQS
Kentaro Tomii, Kazunori Yamada
Bioinformatics (Oxford, England)
|
February 7, 2004
FORTE: a profile-profile comparison tool for protein fold recognition
Kentaro Tomii, Yutaka Akiyama
ACS Omega
|
June 16, 2025
Application of Anomaly Detection to Identify Important Features of Protein Dynamics
Yu Yamamori, Kentaro Tomii
Scientific Reports
|
September 1, 2019
Accurate Classification of Biological and non-Biological Interfaces in Protein Crystal Structures using Subtle Covariation Signals
Yoshinori Fukasawa, Kentaro Tomii
Methods (San Diego, Calif.)
|
August 16, 2015
Protein ligand-binding site comparison by a reduced vector representation derived from multidimensional scaling of generalized description of binding sites
Tsukasa Nakamura, Kentaro Tomii
Methods in Molecular Biology (Clifton, N.J.)
|
July 5, 2020
Structural Modeling and Ligand-Binding Prediction for Analysis of Structure-Unknown and Function-Unknown Proteins Using FORTE Alignment and PoSSuM Pocket Search
Yuko Tsuchiya, Kentaro Tomii
BMC Bioinformatics
|
January 11, 2020
DeepECA: an end-to-end learning framework for protein contact prediction from a multiple sequence alignment
Hiroyuki Fukuda, Kentaro Tomii
Page
of 9