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BMC Bioinformatics|July 17, 2013
SLiMScape: a protein short linear motif analysis plugin for CytoscapeKevin T O'Brien, Niall J Haslam, Denis C ShieldsBMC Bioinformatics|May 22, 2012
Profile-based short linear protein motif discoveryNiall J Haslam, Denis C ShieldsScience Signaling|September 27, 2012
Peptide-binding domains: are limp handshakes safest?Niall J Haslam, Denis C ShieldsJournal of Molecular Biology|November 15, 2011
Prediction of short linear protein binding regionsCatherine Mooney, Gianluca Pollastri, Denis C Shields, et al.Plos One|October 12, 2012
Towards the improved discovery and design of functional peptides: common features of diverse classes permit generalized prediction of bioactivityCatherine Mooney, Niall J Haslam, Gianluca Pollastri, et al.Nucleic Acids Research|May 26, 2010
SLiMFinder: a web server to find novel, significantly over-represented, short protein motifsNorman E Davey, Niall J Haslam, Denis C Shields, et al.Nucleic Acids Research|May 31, 2011
SLiMSearch 2.0: biological context for short linear motifs in proteinsNorman E Davey, Niall J Haslam, Denis C Shields, et al.Bioinformatics (Oxford, England)|March 19, 2013
PeptideLocator: prediction of bioactive peptides in protein sequencesCatherine Mooney, Niall J Haslam, Thérèse A Holton, et al.Royal Society Open Science|March 29, 2020
Prediction of polyproline II secondary structure propensity in proteinsKevin T O'Brien, Catherine Mooney, Cyril Lopez, et al.Frontiers in Microbiology|January 31, 2014
Potential of known and short prokaryotic protein motifs as a basis for novel peptide-based antibacterial therapeutics: a computational surveyHeini Ruhanen, Daniel Hurley, Ambarnil Ghosh, et al.Pageof 14