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Journal of Computational Chemistry|January 29, 2017
DelPhiForce, a tool for electrostatic force calculations: Applications to macromolecular bindingLin Li, Arghya Chakravorty, Emil AlexovLangmuir : the ACS Journal of Surfaces and Colloids|February 10, 2017
A New DelPhi Feature for Modeling Electrostatic Potential around Proteins: Role of Bound Ions and Implications for Zeta-PotentialArghya Chakravorty, Zhe Jia, Lin Li, et al.Journal of Computational Chemistry|June 12, 2017
Treating ion distribution with Gaussian-based smooth dielectric function in DelPhiZhe Jia, Lin Li, Arghya Chakravorty, et al.Journal of Chemical Theory and Computation|January 20, 2018
Reproducing the Ensemble Average Polar Solvation Energy of a Protein from a Single Structure: Gaussian-Based Smooth Dielectric Function for Macromolecular ModelingArghya Chakravorty, Zhe Jia, Lin Li, et al.Journal of Computational Chemistry|January 31, 2019
A grid-based algorithm in conjunction with a gaussian-based model of atoms for describing molecular geometryArghya Chakravorty, Emilio Gallicchio, Emil AlexovBioinformatics (Oxford, England)|October 17, 2017
DelPhiForce web server: electrostatic forces and energy calculations and visualizationLin Li, Zhe Jia, Yunhui Peng, et al.Frontiers in Molecular Biosciences|October 15, 2019
Modeling Electrostatic Force in Protein-Protein RecognitionH B Mihiri Shashikala, Arghya Chakravorty, Emil AlexovJournal of Computational Chemistry|October 30, 2024
On delivering polar solvation free energy of proteins from energy minimized structures using a regularized super-Gaussian Poisson-Boltzmann modelShailesh Kumar Panday, Arghya Chakravorty, Shan Zhao, et al.Journal of Chemical Information and Modeling|March 11, 2020
Capturing the Effects of Explicit Waters in Implicit Electrostatics Modeling: Qualitative Justification of Gaussian-Based Dielectric Models in DelPhiArghya Chakravorty, Shailesh Panday, Swagata Pahari, et al.International Journal of Molecular Sciences|January 1, 2021
BION-2: Predicting Positions of Non-Specifically Bound Ions on Protein Surface by a Gaussian-Based Treatment of ElectrostaticsH B Mihiri Shashikala, Arghya Chakravorty, Shailesh Kumar Panday, et al.Pageof 1,317