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Pattern Recognition Letters|September 9, 2010
A protein sequence meta-functional signature for calcium binding residue predictionJeremy A Horst, Ram SamudralaMethods in Molecular Biology (Clifton, N.J.)|April 22, 2009
Inferring molecular interactions pathways from eQTL dataImran Rashid, Jason McDermott, Ram SamudralaFrontiers in Pharmacology|May 14, 2023
Effective holistic characterization of small molecule effects using heterogeneous biological networksWilliam Mangione, Zackary Falls, Ram SamudralaFrontiers in Pharmacology|September 12, 2022
Optimal COVID-19 therapeutic candidate discovery using the CANDO platformWilliam Mangione, Zackary Falls, Ram SamudralaBioinformatics (Oxford, England)|May 28, 2005
Functional annotation from predicted protein interaction networksJason McDermott, Roger Bumgarner, Ram SamudralaMethods in Molecular Biology (Clifton, N.J.)|April 22, 2009
Prediction and integration of regulatory and protein-protein interactionsDuangdao Wichadakul, Jason McDermott, Ram SamudralaBMC Structural Biology|May 7, 2008
Improving the accuracy of template-based predictions by mixing and matching between initial modelsTianyun Liu, Michal Guerquin, Ram SamudralaMini Reviews in Medicinal Chemistry|February 20, 2015
Multiscale modelling of relationships between protein classes and drug behavior across all diseases using the CANDO platformGeetika Sethi, Gaurav Chopra, Ram SamudralaPlos Pathogens|April 25, 2009
Accurate prediction of secreted substrates and identification of a conserved putative secretion signal for type III secretion systemsRam Samudrala, Fred Heffron, Jason E McDermottProteins|May 8, 2009
A novel method for predicting and using distance constraints of high accuracy for refining protein structure predictionTianyun Liu, Jeremy A Horst, Ram SamudralaPageof 15