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Physical Biology|April 7, 2018
Identification of gene regulation models from single-cell dataLisa Weber, William Raymond, Brian MunskyBio-Protocol|September 9, 2022
Visualization, Quantification, and Modeling of Endogenous RNA Polymerase II Phosphorylation at a Single-copy Gene in Living CellsLinda S Forero-Quintero, William Raymond, Brian Munsky, et al.Physical Biology|June 19, 2015
From analog to digital models of gene regulationBrian Munsky, Gregor NeuertThe Journal of Chemical Physics|February 8, 2006
The finite state projection algorithm for the solution of the chemical master equationBrian Munsky, Mustafa KhammashPhysical Biology|April 22, 2017
The finite state projection approach to analyze dynamics of heterogeneous populationsRob Johnson, Brian MunskyACS Synthetic Biology|November 18, 2021
Exploiting Noise, Non-Linearity, and Feedback for Differential Control of Multiple Synthetic Cells with a Single Optogenetic InputMichael P May, Brian MunskyPlos Computational Biology|January 16, 2019
The finite state projection based Fisher information matrix approach to estimate information and optimize single-cell experimentsZachary R Fox, Brian MunskyPlos Computational Biology|October 17, 2019
Computational design and interpretation of single-RNA translation experimentsLuis U Aguilera, William Raymond, Zachary R Fox, et al.Molecular Systems Biology|November 6, 2009
Listening to the noise: random fluctuations reveal gene network parametersBrian Munsky, Brooke Trinh, Mustafa KhammashThe Journal of Chemical Physics|December 6, 2006
Reduction and solution of the chemical master equation using time scale separation and finite state projectionSlaven Peles, Brian Munsky, Mustafa KhammashPageof 8