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Briefings in Bioinformatics|June 4, 2018
Toward more accurate prediction of caspase cleavage sites: a comprehensive review of current methods, tools and featuresYu Bao, Simone Marini, Takeyuki Tamura, et al.
Journal of Bioinformatics and Computational Biology|July 11, 2019
Deep learning with evolutionary and genomic profiles for identifying cancer subtypesChun-Yu Lin, Peiying Ruan, Ruiming Li, et al.
IEEE/ACM Transactions on Computational Biology and Bioinformatics|September 14, 2021
A Novel Method for Inferring Chemical Compounds With Prescribed Topological Substructures Based on Integer ProgrammingJianshen Zhu, Naveed Ahmed Azam, Fan Zhang, et al.
Algorithms for Molecular Biology : AMB|August 15, 2021
A novel method for inference of acyclic chemical compounds with bounded branch-height based on artificial neural networks and integer programmingNaveed Ahmed Azam, Jianshen Zhu, Yanming Sun, et al.
IEEE/ACM Transactions on Computational Biology and Bioinformatics|August 22, 2024
A Method for Inferring Polymers Based on Linear Regression and Integer ProgrammingRyota Ido, Shengjuan Cao, Jianshen Zhu, et al.
Briefings in Bioinformatics|June 14, 2018
iProt-Sub: a comprehensive package for accurately mapping and predicting protease-specific substrates and cleavage sitesJiangning Song, Yanan Wang, Fuyi Li, et al.
Frontiers in Genetics|February 13, 2025
Quadratic descriptors and reduction methods in a two-layered model for compound inferenceJianshen Zhu, Naveed Ahmed Azam, Shengjuan Cao, et al.
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