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Methods in Molecular Biology (Clifton, N.J.)
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January 27, 2023
RNA Secondary Structure Prediction Based on Energy Models
Manato Akiyama, Kengo Sato
NAR Genomics and Bioinformatics
|
February 25, 2022
Informative RNA base embedding for RNA structural alignment and clustering by deep representation learning
Manato Akiyama, Yasubumi Sakakibara
Journal of Cheminformatics
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August 23, 2024
Deep learning of multimodal networks with topological regularization for drug repositioning
Yuto Ohnuki, Manato Akiyama, Yasubumi Sakakibara
Genes
|
November 24, 2022
Direct Inference of Base-Pairing Probabilities with Neural Networks Improves Prediction of RNA Secondary Structures with Pseudoknots
Manato Akiyama, Yasubumi Sakakibara, Kengo Sato
Journal of Bioinformatics and Computational Biology
|
January 9, 2019
A max-margin training of RNA secondary structure prediction integrated with the thermodynamic model
Manato Akiyama, Kengo Sato, Yasubumi Sakakibara
Nature Communications
|
February 12, 2021
RNA secondary structure prediction using deep learning with thermodynamic integration
Kengo Sato, Manato Akiyama, Yasubumi Sakakibara
Communications Chemistry
|
August 6, 2025
Leveraging tree-transformer VAE with fragment tokenization for high-performance large chemical model generation
Tensei Inukai, Aoi Yamato, Manato Akiyama, et al.
Bioinformatics Advances
|
January 26, 2023
Genomic style: yet another deep-learning approach to characterize bacterial genome sequences
Yuka Yoshimura, Akifumi Hamada, Yohann Augey, et al.
Nature Communications
|
March 3, 2026
Cross-species gene redesign leveraging ortholog information and generative modeling
Manato Akiyama, Motohiko Tashiro, Ying Huang, et al.
Communications Chemistry
|
November 17, 2023
Variational autoencoder-based chemical latent space for large molecular structures with 3D complexity
Toshiki Ochiai, Tensei Inukai, Manato Akiyama, et al.
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of 1
Search research articles
Search
Showing results (1-10 of 10) with videos related to
Sort By:
Page
of 1
Methods in Molecular Biology (Clifton, N.J.)
|
January 27, 2023
RNA Secondary Structure Prediction Based on Energy Models
Manato Akiyama, Kengo Sato
NAR Genomics and Bioinformatics
|
February 25, 2022
Informative RNA base embedding for RNA structural alignment and clustering by deep representation learning
Manato Akiyama, Yasubumi Sakakibara
Journal of Cheminformatics
|
August 23, 2024
Deep learning of multimodal networks with topological regularization for drug repositioning
Yuto Ohnuki, Manato Akiyama, Yasubumi Sakakibara
Genes
|
November 24, 2022
Direct Inference of Base-Pairing Probabilities with Neural Networks Improves Prediction of RNA Secondary Structures with Pseudoknots
Manato Akiyama, Yasubumi Sakakibara, Kengo Sato
Journal of Bioinformatics and Computational Biology
|
January 9, 2019
A max-margin training of RNA secondary structure prediction integrated with the thermodynamic model
Manato Akiyama, Kengo Sato, Yasubumi Sakakibara
Nature Communications
|
February 12, 2021
RNA secondary structure prediction using deep learning with thermodynamic integration
Kengo Sato, Manato Akiyama, Yasubumi Sakakibara
Communications Chemistry
|
August 6, 2025
Leveraging tree-transformer VAE with fragment tokenization for high-performance large chemical model generation
Tensei Inukai, Aoi Yamato, Manato Akiyama, et al.
Bioinformatics Advances
|
January 26, 2023
Genomic style: yet another deep-learning approach to characterize bacterial genome sequences
Yuka Yoshimura, Akifumi Hamada, Yohann Augey, et al.
Nature Communications
|
March 3, 2026
Cross-species gene redesign leveraging ortholog information and generative modeling
Manato Akiyama, Motohiko Tashiro, Ying Huang, et al.
Communications Chemistry
|
November 17, 2023
Variational autoencoder-based chemical latent space for large molecular structures with 3D complexity
Toshiki Ochiai, Tensei Inukai, Manato Akiyama, et al.
Page
of 1