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Journal of Chemical Theory and Computation
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June 14, 2021
Dummy Atoms in Alchemical Free Energy Calculations
Markus Fleck, Marcus Wieder, Stefan Boresch
Frontiers in Molecular Biosciences
|
September 23, 2022
Relative binding free energy calculations with transformato: A molecular dynamics engine-independent tool
Johannes Karwounopoulos, Marcus Wieder, Stefan Boresch
Frontiers in Chemistry
|
March 6, 2023
Protex-A Python utility for proton exchange in molecular dynamics simulations
Florian Joerg, Marcus Wieder, Christian Schröder
Chemical Science
|
September 27, 2021
Fitting quantum machine learning potentials to experimental free energy data: predicting tautomer ratios in solution
Marcus Wieder, Josh Fass, John D Chodera
Journal of Chemical Information and Modeling
|
September 11, 2025
Transferable Neural Network Potentials and Condensed Phase Properties
Anna Katharina Picha, Marcus Wieder, Stefan Boresch
Frontiers in Chemistry
|
June 20, 2022
Improving Small Molecule pK <sub><i>a</i></sub> Prediction Using Transfer Learning With Graph Neural Networks
Fritz Mayr, Marcus Wieder, Oliver Wieder, et al.
Natural Product Communications
|
December 15, 2018
Pharmacophore Models Derived From Molecular Dynamics Simulations of Protein-Ligand Complexes: A Case Study
Marcus Wieder, Ugo Perricone, Thomas Seidel, et al.
Journal of Computational Chemistry
|
April 29, 2022
Alchemical free energy simulations without speed limits. A generic framework to calculate free energy differences independent of the underlying molecular dynamics program
Marcus Wieder, Markus Fleck, Benedict Braunsfeld, et al.
Journal of Chemical Theory and Computation
|
August 24, 2023
Calculations of Absolute Solvation Free Energies with Transformato─Application to the FreeSolv Database Using the CGenFF Force Field
Johannes Karwounopoulos, Åsmund Kaupang, Marcus Wieder, et al.
Monatshefte Fur Chemie
|
April 13, 2016
Comparing pharmacophore models derived from crystal structures and from molecular dynamics simulations
Marcus Wieder, Ugo Perricone, Thomas Seidel, et al.
Page
of 3
Search research articles
Search
Showing results (1-10 of 27) with videos related to
Sort By:
Page
of 3
Journal of Chemical Theory and Computation
|
June 14, 2021
Dummy Atoms in Alchemical Free Energy Calculations
Markus Fleck, Marcus Wieder, Stefan Boresch
Frontiers in Molecular Biosciences
|
September 23, 2022
Relative binding free energy calculations with transformato: A molecular dynamics engine-independent tool
Johannes Karwounopoulos, Marcus Wieder, Stefan Boresch
Frontiers in Chemistry
|
March 6, 2023
Protex-A Python utility for proton exchange in molecular dynamics simulations
Florian Joerg, Marcus Wieder, Christian Schröder
Chemical Science
|
September 27, 2021
Fitting quantum machine learning potentials to experimental free energy data: predicting tautomer ratios in solution
Marcus Wieder, Josh Fass, John D Chodera
Journal of Chemical Information and Modeling
|
September 11, 2025
Transferable Neural Network Potentials and Condensed Phase Properties
Anna Katharina Picha, Marcus Wieder, Stefan Boresch
Frontiers in Chemistry
|
June 20, 2022
Improving Small Molecule pK <sub><i>a</i></sub> Prediction Using Transfer Learning With Graph Neural Networks
Fritz Mayr, Marcus Wieder, Oliver Wieder, et al.
Natural Product Communications
|
December 15, 2018
Pharmacophore Models Derived From Molecular Dynamics Simulations of Protein-Ligand Complexes: A Case Study
Marcus Wieder, Ugo Perricone, Thomas Seidel, et al.
Journal of Computational Chemistry
|
April 29, 2022
Alchemical free energy simulations without speed limits. A generic framework to calculate free energy differences independent of the underlying molecular dynamics program
Marcus Wieder, Markus Fleck, Benedict Braunsfeld, et al.
Journal of Chemical Theory and Computation
|
August 24, 2023
Calculations of Absolute Solvation Free Energies with Transformato─Application to the FreeSolv Database Using the CGenFF Force Field
Johannes Karwounopoulos, Åsmund Kaupang, Marcus Wieder, et al.
Monatshefte Fur Chemie
|
April 13, 2016
Comparing pharmacophore models derived from crystal structures and from molecular dynamics simulations
Marcus Wieder, Ugo Perricone, Thomas Seidel, et al.
Page
of 3