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Methods in Molecular Biology (Clifton, N.J.)|May 13, 2020
In Situ Sequencing: A High-Throughput, Multi-Targeted Gene Expression Profiling Technique for Cell Typing in Tissue SectionsMarkus M Hilscher, Daniel Gyllborg, Chika Yokota, et al.
The FEBS Journal|March 16, 2018
Placing RNA in context and space - methods for spatially resolved transcriptomicsCarina Strell, Markus M Hilscher, Navya Laxman, et al.
BMC Biology|May 24, 2022
Spatial and temporal heterogeneity in the lineage progression of fine oligodendrocyte subtypesMarkus M Hilscher, Christoffer Mattsson Langseth, Petra Kukanja, et al.
Nucleic Acids Research|September 29, 2020
Hybridization-based in situ sequencing (HybISS) for spatially resolved transcriptomics in human and mouse brain tissueDaniel Gyllborg, Christoffer Mattsson Langseth, Xiaoyan Qian, et al.
Communications Biology|August 25, 2021
Comprehensive in situ mapping of human cortical transcriptomic cell typesChristoffer Mattsson Langseth, Daniel Gyllborg, Jeremy A Miller, et al.
Scientific Reports|May 13, 2022
Direct RNA targeted in situ sequencing for transcriptomic profiling in tissueHower Lee, Sergio Marco Salas, Daniel Gyllborg, et al.
BMC Bioinformatics|August 1, 2021
Matisse: a MATLAB-based analysis toolbox for in situ sequencing expression mapsSergio Marco Salas, Daniel Gyllborg, Christoffer Mattsson Langseth, et al.
Annual Review of Genomics and Human Genetics|April 5, 2023
Padlock Probe-Based Targeted In Situ Sequencing: Overview of Methods and ApplicationsAnastasia Magoulopoulou, Sergio Marco Salas, Katarína Tiklová, et al.
Nature Communications|February 6, 2019
Single-cell RNA sequencing reveals midbrain dopamine neuron diversity emerging during mouse brain developmentKatarína Tiklová, Åsa K Björklund, Laura Lahti, et al.
BMC Biology|October 20, 2020
Automated identification of the mouse brain's spatial compartments from in situ sequencing dataGabriele Partel, Markus M Hilscher, Giorgia Milli, et al.
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