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Molecular & Cellular Proteomics : MCP|March 30, 2011
5'TRU: identification and analysis of translationally regulative 5'untranslated regions in amino acid starved yeast cellsNicole Rachfall, Isabelle Heinemeyer, Burkhard Morgenstern, et al.
Plos Computational Biology|October 21, 2016
rasbhari: Optimizing Spaced Seeds for Database Searching, Read Mapping and Alignment-Free Sequence ComparisonLars Hahn, Chris-André Leimeister, Rachid Ounit, et al.
BMC Bioinformatics|December 18, 2019
Read-SpaM: assembly-free and alignment-free comparison of bacterial genomes with low sequencing coverageAnna-Katharina Lau, Svenja Dörrer, Chris-André Leimeister, et al.
Nucleic Acids Research|July 18, 2006
AUGUSTUS: ab initio prediction of alternative transcriptsMario Stanke, Oliver Keller, Irfan Gunduz, et al.
Plos One|March 4, 2014
Meta-analysis of pathway enrichment: combining independent and dependent omics data setsAlexander Kaever, Manuel Landesfeind, Kirstin Feussner, et al.
Plos One|February 11, 2020
The number of k-mer matches between two DNA sequences as a function of k and applications to estimate phylogenetic distancesSophie Röhling, Alexander Linne, Jendrik Schellhorn, et al.
Gigascience|December 12, 2018
Prot-SpaM: fast alignment-free phylogeny reconstruction based on whole-proteome sequencesChris-Andre Leimeister, Jendrik Schellhorn, Svenja Dörrer, et al.
BMC Bioinformatics|April 30, 2008
Gene prediction in metagenomic fragments: a large scale machine learning approachKatharina J Hoff, Maike Tech, Thomas Lingner, et al.
NAR Genomics and Bioinformatics|February 12, 2021
'Multi-SpaM': a maximum-likelihood approach to phylogeny reconstruction using multiple spaced-word matches and quartet treesThomas Dencker, Chris-André Leimeister, Michael Gerth, et al.
Nucleic Acids Research|May 26, 2010
DIALIGN-TX and multiple protein alignment using secondary structure information at GOBICSAmarendran R Subramanian, Suvrat Hiran, Rasmus Steinkamp, et al.
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