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Virologie (Montrouge, France)|January 9, 2020
Metagenomics applied to environmental viral communitiesSimon Roux, Didier Debroas, François Enault
Msystems|October 1, 2024
MVP: a modular viromics pipeline to identify, filter, cluster, annotate, and bin viruses from metagenomesClément Coclet, Antonio Pedro Camargo, Simon Roux
FEMS Microbiology Ecology|November 10, 2011
Comparison of 16S rRNA and protein-coding genes as molecular markers for assessing microbial diversity (Bacteria and Archaea) in ecosystemsSimon Roux, François Enault, Gisèle Bronner, et al.
Nature Microbiology|August 27, 2025
A call for caution in the biological interpretation of viral auxiliary metabolic genesCody Martin, Joanne B Emerson, Simon Roux, et al.
Infection and Immunity|December 12, 2012
Association with soil bacteria enhances p38-dependent infection resistance in Caenorhabditis elegansSirena Montalvo-Katz, Hao Huang, Michael David Appel, et al.
Elife|July 23, 2015
Viral dark matter and virus-host interactions resolved from publicly available microbial genomesSimon Roux, Steven J Hallam, Tanja Woyke, et al.
Microorganisms|September 28, 2023
Solvent-Producing Clostridia RevisitedDavid T Jones, Frederik Schulz, Simon Roux, et al.
Therapeutic Advances in Psychopharmacology|December 8, 2018
First-generation versus second-generation long-acting injectable antipsychotic drugs and time to relapseJames M Stone, Simon Roux, David Taylor, et al.
Plos One|July 19, 2012
Evolution and diversity of the Microviridae viral family through a collection of 81 new complete genomes assembled from virome readsSimon Roux, Mart Krupovic, Axel Poulet, et al.
BMC Bioinformatics|March 21, 2014
Metavir 2: new tools for viral metagenome comparison and assembled virome analysisSimon Roux, Jeremy Tournayre, Antoine Mahul, et al.
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