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Molecular Ecology|November 29, 2018
Patterns of transposable element variation and clinality in DrosophilaJeffrey R Adrion, David J Begun, Matthew W HahnPlos Biology|August 4, 2005
Genomic islands of speciation in Anopheles gambiaeThomas L Turner, Matthew W Hahn, Sergey V NuzhdinEvolution & Development|November 22, 2008
Abundant genetic variation in transcript level during early Drosophila developmentSergey V Nuzhdin, Danielle M Tufts, Matthew W HahnGenome Biology and Evolution|October 26, 2011
No excess gene movement is detected off the avian or lepidopteran Z chromosomeMelissa A Toups, James B Pease, Matthew W HahnCurrent Biology : CB|June 4, 2011
Pervasive multinucleotide mutational events in eukaryotesDaniel R Schrider, Jonathan N Hourmozdi, Matthew W HahnBioinformatics (Oxford, England)|July 14, 2020
The ortholog conjecture revisited: the value of orthologs and paralogs in function predictionMoses Stamboulian, Rafael F Guerrero, Matthew W Hahn, et al.Molecular Ecology|February 1, 2017
Genomic evidence of gene flow during reinforcement in Texas PhloxFederico Roda, Fábio K Mendes, Matthew W Hahn, et al.Systematic Biology|April 19, 2017
Gene-Tree Reconciliation with MUL-Trees to Resolve Polyploidy EventsW C Thomas Gregg, S Hussain Ather, Matthew W HahnISME Communications|November 8, 2023
High-resolution phylogenetic and population genetic analysis of microbial communities with RoC-ITSDouglas B Rusch, Jie Huang, Chris Hemmerich, et al.Theoretical Population Biology|September 29, 2025
Inconsistency of parsimony under the multispecies coalescentDaniel A Rickert, Louis Wai-Tong Fan, Matthew W HahnPageof 23