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Biopolymers|February 3, 2004
Structural motifs in ribosomal RNAs: implications for RNA design and genomicsJulie Zorn, Hin Hark Gan, Nahum Shiffeldrim, et al.BMC Bioinformatics|June 2, 2011
RAG: an update to the RNA-As-Graphs resourceJoseph A Izzo, Namhee Kim, Shereef Elmetwaly, et al.Nucleic Acids Research|August 26, 2015
RAG-3D: a search tool for RNA 3D substructuresMai Zahran, Cigdem Sevim Bayrak, Shereef Elmetwaly, et al.Bioinformatics (Oxford, England)|August 3, 2019
RAG-Web: RNA structure prediction/design using RNA-As-GraphsGrace Meng, Marva Tariq, Swati Jain, et al.Biochemistry|February 5, 2025
A Cascade of Conformational Switches in SARS-CoV-2 Frameshifting: Coregulation by Upstream and Downstream ElementsSamuel Lee, Shuting Yan, Abhishek Dey, et al.Nucleic Acids Research|August 24, 2018
A pipeline for computational design of novel RNA-like topologiesSwati Jain, Alain Laederach, Silvia B V Ramos, et al.Nucleic Acids Research|September 16, 2011
Predicting coaxial helical stacking in RNA junctionsChristian Laing, Dongrong Wen, Jason T L Wang, et al.Biochimica Et Biophysica Acta. General Subjects|January 20, 2020
Identification of novel RNA design candidates by clustering the extended RNA-As-Graphs librarySwati Jain, Qiyao Zhu, Amiel S P Paz, et al.Biorxiv : the Preprint Server for Biology|July 9, 2024
An intricate balancing act: Upstream and downstream frameshift co-regulatory elementsSamuel Lee, Shuting Yan, Abhishek Dey, et al.Theoretical Chemistry Accounts|March 6, 2013
Perspective: pre-chemistry conformational changes in DNA polymerase mechanismsTamar Schlick, Karunesh Arora, William A Beard, et al.Pageof 18