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Genome Biology|October 30, 2019
RaGOO: fast and accurate reference-guided scaffolding of draft genomesMichael Alonge, Sebastian Soyk, Srividya Ramakrishnan, et al.Genome Biology|December 15, 2022
Automated assembly scaffolding using RagTag elevates a new tomato system for high-throughput genome editingMichael Alonge, Ludivine Lebeigle, Melanie Kirsche, et al.Bioinformatics (Oxford, England)|April 10, 2009
CloudBurst: highly sensitive read mapping with MapReduceMichael C SchatzThe Plant Cell|October 21, 2022
Establishing Physalis as a Solanaceae model system enables genetic reevaluation of the inflated calyx syndromeJia He, Michael Alonge, Srividya Ramakrishnan, et al.Nature Plants|July 12, 2019
Author Correction: Duplication of a domestication locus neutralized a cryptic variant that caused a breeding barrier in tomatoSebastian Soyk, Zachary H Lemmon, Fritz J Sedlazeck, et al.Nature Plants|May 8, 2019
Duplication of a domestication locus neutralized a cryptic variant that caused a breeding barrier in tomatoSebastian Soyk, Zachary H Lemmon, Fritz J Sedlazeck, et al.Cell Systems|October 21, 2021
Democratizing long-read genome assemblyMelanie Kirsche, Michael C SchatzBMC Bioinformatics|November 1, 2022
Sketching and sampling approaches for fast and accurate long read classificationArun Das, Michael C SchatzPageof 20