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Metabolites|October 7, 2020
BALSAM-An Interactive Online Platform for Breath Analysis, Visualization and ClassificationPhilipp Weber, Josch Konstantin Pauling, Markus List, et al.Bioinformatics (Oxford, England)|September 13, 2019
Large-scale inference of competing endogenous RNA networks with sparse partial correlationMarkus List, Azim Dehghani Amirabad, Dennis Kostka, et al.Journal of Integrative Bioinformatics|December 18, 2015
OpenLabNotes--An Electronic Laboratory Notebook Extension for OpenLabFrameworkMarkus List, Michael Franz, Qihua Tan, et al.Bioinformatics Advances|March 11, 2024
Making mouse transcriptomics deconvolution accessible with immunedeconvLorenzo Merotto, Gregor Sturm, Alexander Dietrich, et al.Briefings in Bioinformatics|August 12, 2025
Single-cell differential expression analysis between conditions within nested settingsLeon Hafner, Gregor Sturm, Sarah Lumpp, et al.Computational and Structural Biotechnology Journal|January 26, 2023
Network-based approaches for modeling disease regulation and progressionGihanna Galindez, Sepideh Sadegh, Jan Baumbach, et al.Bioinformatics (Oxford, England)|November 30, 2020
A framework for modeling epistatic interactionDavid B Blumenthal, Jan Baumbach, Markus Hoffmann, et al.Bioinformatics (Oxford, England)|July 15, 2025
Deep learning models for unbiased sequence-based PPI prediction plateau at an accuracy of 0.65Timo Reim, Anne Hartebrodt, David B Blumenthal, et al.Gigascience|November 9, 2025
NApy: efficient statistics in Python for large-scale heterogeneous data with enhanced support for missing dataFabian Woller, Lis Arend, Christian Fuchsberger, et al.Microbial Biotechnology|November 2, 2024
AI in microbiome-related healthcareNiklas Probul, Zihua Huang, Christina Caroline Saak, et al.Pageof 14