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Plos Computational Biology|March 19, 2013
Interpretation of genomic variants using a unified biological network approachEkta Khurana, Yao Fu, Jieming Chen, et al.Genome Biology|April 7, 2017
Structuring supplemental materials in support of reproducibilityDov Greenbaum, Joel Rozowsky, Victoria Stodden, et al.Bioinformatics (Oxford, England)|April 1, 2021
Gene Tracer: a smart, interactive, voice-controlled Alexa skill For gene information retrieval and browsing, mutation annotation and network visualizationShaoke Lou, Tianxiao Li, Jason Liu, et al.BMC Systems Biology|July 31, 2013
Identification of yeast cell cycle regulated genes based on genomic featuresChao Cheng, Yao Fu, Linsheng Shen, et al.Plos Computational Biology|October 21, 2016
DREISS: Using State-Space Models to Infer the Dynamics of Gene Expression Driven by External and Internal Regulatory NetworksDaifeng Wang, Fei He, Sergei Maslov, et al.Current Protocols in Bioinformatics|May 3, 2017
Using FunSeq2 for Coding and Non-Coding Variant Annotation and PrioritizationPriyanka Dhingra, Yao Fu, Mark Gerstein, et al.Plos Computational Biology|June 26, 2020
Epigenome-based splicing prediction using a recurrent neural networkDonghoon Lee, Jing Zhang, Jason Liu, et al.Nucleic Acids Research|January 12, 2024
Less-is-more: selecting transcription factor binding regions informative for motif inferenceJinrui Xu, Jiahao Gao, Pengyu Ni, et al.Genome Biology|September 3, 2009
mRNA expression profiles show differential regulatory effects of microRNAs between estrogen receptor-positive and estrogen receptor-negative breast cancerChao Cheng, Xuping Fu, Pedro Alves, et al.Genome Biology|September 8, 2021
Recovering genotypes and phenotypes using allele-specific genesGamze Gürsoy, Nancy Lu, Sarah Wagner, et al.Pageof 84