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Biorxiv : the Preprint Server for Biology|July 3, 2023
Cryo2StructData: A Large Labeled Cryo-EM Density Map Dataset for AI-based Modeling of Protein StructuresNabin Giri, Liguo Wang, Jianlin ChengScientific Data|May 6, 2024
Cryo2StructData: A Large Labeled Cryo-EM Density Map Dataset for AI-based Modeling of Protein StructuresNabin Giri, Liguo Wang, Jianlin ChengComputational and Structural Biotechnology Journal|July 21, 2025
A labeled dataset for AI-based cryo-EM map enhancementNabin Giri, Xiao Chen, Liguo Wang, et al.Biorxiv : the Preprint Server for Biology|April 1, 2025
A Labeled Dataset for AI-based Cryo-EM Map EnhancementNabin Giri, Xiao Chen, Liguo Wang, et al.Biomolecules|November 27, 2024
Correction: Giri et al. Improving Protein-Ligand Interaction Modeling with cryo-EM Data, Templates, and Deep Learning in 2021 Ligand Model Challenge. <i>Biomolecules</i> 2023, <i>13</i>, 132Nabin Giri, Jianlin ChengBiorxiv : the Preprint Server for Biology|January 23, 2024
De Novo Atomic Protein Structure Modeling for Cryo-EM Density Maps Using 3D Transformer and Hidden Markov ModelNabin Giri, Jianlin ChengBiomolecules|January 21, 2023
Improving Protein-Ligand Interaction Modeling with cryo-EM Data, Templates, and Deep Learning in 2021 Ligand Model ChallengeNabin Giri, Jianlin ChengNature Communications|July 1, 2024
De novo atomic protein structure modeling for cryoEM density maps using 3D transformer and HMMNabin Giri, Jianlin ChengCurrent Opinion in Structural Biology|February 11, 2023
Deep learning for reconstructing protein structures from cryo-EM density maps: Recent advances and future directionsNabin Giri, Raj S Roy, Jianlin ChengProteins|April 8, 2025
Protein-Ligand Structure and Affinity Prediction in CASP16 Using a Geometric Deep Learning Ensemble and Flow MatchingAlex Morehead, Jian Liu, Pawan Neupane, et al.Pageof 59