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Journal of Chemical Information and Modeling|August 9, 2017
Grid-Based Surface Generalized Born Model for Calculation of Electrostatic Binding Free EnergiesNegin Forouzesh, Saeed Izadi, Alexey V OnufrievBiorxiv : the Preprint Server for Biology|September 2, 2020
MMGB/SA Consensus Estimate of the Binding Free Energy Between the Novel Coronavirus Spike Protein to the Human ACE2 ReceptorNegin Forouzesh, Alexey V OnufrievThe Journal of Chemical Physics|August 22, 2016
Accuracy limit of rigid 3-point water modelsSaeed Izadi, Alexey V OnufrievJournal of Chemical Information and Modeling|December 10, 2024
Optimal Dielectric Boundary for Binding Free Energy Estimates in the Implicit SolventNegin Forouzesh, Fatemeh Ghafouri, Igor S Tolokh, et al.The Journal of Physical Chemistry Letters|November 18, 2014
Building Water Models: A Different ApproachSaeed Izadi, Ramu Anandakrishnan, Alexey V OnufrievJournal of Chemical Theory and Computation|October 18, 2016
Implicit Solvent Model for Million-Atom Atomistic Simulations: Insights into the Organization of 30-nm Chromatin FiberSaeed Izadi, Ramu Anandakrishnan, Alexey V OnufrievJournal of Chemical Theory and Computation|November 18, 2015
Protein-Ligand Electrostatic Binding Free Energies from Explicit and Implicit SolvationSaeed Izadi, Boris Aguilar, Alexey V OnufrievJournal of Chemical Theory and Computation|October 3, 2022
Fast Polarizable Water Model for Atomistic SimulationsYeyue Xiong, Saeed Izadi, Alexey V OnufrievJournal of Chemical Theory and Computation|December 6, 2018
Why Computed Protein Folding Landscapes Are Sensitive to the Water ModelRamu Anandakrishnan, Saeed Izadi, Alexey V OnufrievJournal of Chemical Theory and Computation|May 26, 2020
Multidimensional Global Optimization and Robustness Analysis in the Context of Protein-Ligand BindingNegin Forouzesh, Abhishek Mukhopadhyay, Layne T Watson, et al.Pageof 10