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Plos Computational Biology|July 12, 2024
Identifying cell states in single-cell RNA-seq data at statistically maximal resolutionPascal Grobecker, Thomas Sakoparnig, Erik van NimwegenElife|January 8, 2021
Whole genome phylogenies reflect the distributions of recombination rates for many bacterial speciesThomas Sakoparnig, Chris Field, Erik van NimwegenScientific Reports|March 15, 2020
Tead transcription factors differentially regulate cortical developmentTanzila Mukhtar, Jeremie Breda, Alice Grison, et al.BMC Bioinformatics|October 2, 2007
Finding regulatory elements and regulatory motifs: a general probabilistic frameworkErik van NimwegenCurrent Opinion in Structural Biology|May 23, 2006
The types and prevalence of alternative splice formsMihaela Zavolan, Erik van NimwegenBiology Direct|December 17, 2008
The evolution of domain-content in bacterial genomesNacho Molina, Erik van NimwegenPlos One|September 21, 2011
Transcription factor binding site positioning in yeast: proximal promoter motifs characterize TATA-less promotersIonas Erb, Erik van NimwegenTrends in Genetics : TIG|May 22, 2009
Scaling laws in functional genome content across prokaryotic clades and lifestylesNacho Molina, Erik van NimwegenPlos Computational Biology|January 7, 2010
Disentangling direct from indirect co-evolution of residues in protein alignmentsLukas Burger, Erik van NimwegenMolecular Systems Biology|February 16, 2008
Accurate prediction of protein-protein interactions from sequence alignments using a Bayesian methodLukas Burger, Erik van NimwegenPageof 10