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F1000Research|March 3, 2018
A multi-tool recipe to identify regions of protein-DNA binding and their influence on associated gene expressionDaniel Carlin, Kassi Kosnicki, Sara Garamszegi, et al.Plos Computational Biology|June 23, 2006
Integrated assessment and prediction of transcription factor bindingAndreas Beyer, Christopher Workman, Jens Hollunder, et al.Biorxiv : the Preprint Server for Biology|March 11, 2024
Rare and Common Variants Associated with Alcohol Consumption Identify a Conserved Molecular NetworkBrittany S Leger, John J Meredith, Trey Ideker, et al.Molecular Systems Biology|June 2, 2006
Modeling methanogenesis with a genome-scale metabolic reconstruction of Methanosarcina barkeriAdam M Feist, Johannes C M Scholten, Bernhard Ø Palsson, et al.Molecular Cell|January 21, 2018
Systematic Gene-to-Phenotype Arrays: A High-Throughput Technique for Molecular PhenotypingPhilipp A Jaeger, Lilia Ornelas, Cameron McElfresh, et al.Biorxiv : the Preprint Server for Biology|September 18, 2025
Translating clinical gene sequencing into a foundational representation of tumor subtypeJungHo Kong, Ingoo Lee, Dean Boecher, et al.Molecular Cell|September 23, 2018
DNA Methylation Clocks in Aging: Categories, Causes, and ConsequencesAdam E Field, Neil A Robertson, Tina Wang, et al.Current Opinion in Genetics & Development|July 10, 2019
Mapping the protein-protein and genetic interactions of cancer to guide precision medicineMehdi Bouhaddou, Manon Eckhardt, Zun Zar Chi Naing, et al.Nature Communications|October 10, 2018
Typing tumors using pathways selected by somatic evolutionSheng Wang, Jianzhu Ma, Wei Zhang, et al.Cell|June 16, 2018
Visible Machine Learning for BiomedicineMichael K Yu, Jianzhu Ma, Jasmin Fisher, et al.Pageof 34