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Journal of Complex Networks|November 30, 2020
Graph fractal dimension and the structure of fractal networksPavel Skums, Leonid BunimovichPhysics of Life Reviews|November 2, 2024
Investigating and forecasting infectious disease dynamics using epidemiological and molecular surveillance dataGerardo Chowell, Pavel SkumsJournal of Theoretical Biology|December 29, 2023
Antigenic cooperation in viral populations: Transformation of functions of intra-host viral variantsLeonid Bunimovich, Athulya Ram, Pavel SkumsBioinformatics (Oxford, England)|September 13, 2019
Inference of clonal selection in cancer populations using single-cell sequencing dataPavel Skums, Viachaslau Tsyvina, Alex ZelikovskyProceedings of the National Academy of Sciences of the United States of America|May 6, 2015
Antigenic cooperation among intrahost HCV variants organized into a complex network of cross-immunoreactivityPavel Skums, Leonid Bunimovich, Yury KhudyakovPlos Computational Biology|November 30, 2020
Inference of mutability landscapes of tumors from single cell sequencing dataViachaslau Tsyvina, Alex Zelikovsky, Sagi Snir, et al.Journal of Computational Biology : a Journal of Computational Molecular Cell Biology|September 7, 2021
Scale-Free Spanning Trees and Their Application in Genomic EpidemiologyYury Orlovich, Kirill Kukharenko, Volker Kaibel, et al.Briefings in Bioinformatics|June 23, 2020
Epidemiological data analysis of viral quasispecies in the next-generation sequencing eraSergey Knyazev, Lauren Hughes, Pavel Skums, et al.Nature Communications|April 2, 2024
Early detection of emerging viral variants through analysis of community structure of coordinated substitution networksFatemeh Mohebbi, Alex Zelikovsky, Serghei Mangul, et al.BMC Genomics|December 22, 2020
Analysis of heterogeneous genomic samples using image normalization and machine learningSunitha Basodi, Pelin Icer Baykal, Alex Zelikovsky, et al.Pageof 6