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Evolutionary Bioinformatics Online|October 9, 2009
On the use of bootstrapped topologies in coalescent-based Bayesian MCMC inference: a comparison of estimation and computational efficienciesAllen G Rodrigo, Peter Tsai, Helen ShearmanJournal of Virology|December 29, 2006
Phylogenetic analysis of feline immunodeficiency virus in feral and companion domestic cats of New ZealandJessica J Hayward, John Taylor, Allen G RodrigoBMC Bioinformatics|December 13, 2019
Effective machine-learning assembly for next-generation amplicon sequencing with very low coverageLouis Ranjard, Thomas K F Wong, Allen G RodrigoBMC Bioinformatics|January 24, 2020
Correction to: Effective machine-learning assembly for next-generation amplicon sequencing with very low coverageLouis Ranjard, Thomas K F Wong, Allen G RodrigoPlos One|April 6, 2018
Reassembling haplotypes in a mixture of pooled amplicons when the relative concentrations are known: A proof-of-concept study on the efficient design of next-generation sequencing strategiesLouis Ranjard, Thomas K F Wong, Allen G RodrigoFEMS Microbiology Ecology|September 8, 2025
Within-host microbial selection and multiple microbial generations buffer the loss of host fitness under environmental changeWilliam S Pearman, Allen G Rodrigo, Anna W SantureEvolution, Medicine, and Public Health|February 1, 2014
Frequency-dependent selection drives HBeAg seroconversion in chronic hepatitis B virus infectionBrook G Warner, William G H Abbott, Allen G RodrigoGenetics|August 26, 2009
Adaptive divergence in experimental populations of Pseudomonas fluorescens. IV. Genetic constraints guide evolutionary trajectories in a parallel adaptive radiationMichael J McDonald, Stefanie M Gehrig, Peter L Meintjes, et al.BMC Bioinformatics|October 24, 2018
HaploJuice : accurate haplotype assembly from a pool of sequences with known relative concentrationsThomas K F Wong, Louis Ranjard, Yu Lin, et al.Genetics|September 3, 2004
Pervasive genomic recombination of HIV-1 in vivoDaniel Shriner, Allen G Rodrigo, David C Nickle, et al.Pageof 5