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Bioinformatics (Oxford, England)|February 12, 2002
Improved database searches for orthologous sequences by conditioning on outgroup sequencesPhilip J Cotter, Daniel R Caffrey, Denis C ShieldsBioinformatics (Oxford, England)|February 14, 2003
Wrapping up BLAST and other applications for use on Unix clustersKarsten Hokamp, Denis C Shields, Kenneth H Wolfe, et al.Royal Society Open Science|December 12, 2019
Implications of kappa-casein evolutionary diversity for the self-assembly and aggregation of casein micellesJean Manguy, Denis C ShieldsBiology Direct|August 2, 2011
Shift in the isoelectric-point of milk proteins as a consequence of adaptive divergence between the milks of mammalian speciesNora Khaldi, Denis C ShieldsJournal of Molecular Biology|July 14, 2012
Evolution of specific protein-protein interaction sites following gene duplicationDaniel Aiello, Daniel R CaffreyBMC Bioinformatics|September 8, 2004
GASP: Gapped Ancestral Sequence Prediction for proteinsRichard J Edwards, Denis C ShieldsComparative and Functional Genomics|July 17, 2008
Integrating genotypic data with transcriptomic and proteomic dataDenis C Shields, Aisling M O'HalloranBMC Bioinformatics|May 22, 2012
Profile-based short linear protein motif discoveryNiall J Haslam, Denis C ShieldsBMC Genomics|April 18, 2008
Marked variation in predicted and observed variability of tandem repeat loci across the human genomeColm T O'Dushlaine, Denis C ShieldsScience Signaling|September 27, 2012
Peptide-binding domains: are limp handshakes safest?Niall J Haslam, Denis C ShieldsPageof 16