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Nucleic Acids Research|June 2, 2009
Measuring spatial preferences at fine-scale resolution identifies known and novel cis-regulatory element candidates and functional motif-pair relationshipsKen Daigoro Yokoyama, Uwe Ohler, Gregory A Wray
Bioinformatics (Oxford, England)|September 17, 2014
JAMM: a peak finder for joint analysis of NGS replicatesMahmoud M Ibrahim, Scott A Lacadie, Uwe Ohler
Genome Biology|November 3, 2018
omniCLIP: probabilistic identification of protein-RNA interactions from CLIP-seq dataPhilipp Drewe-Boss, Hans-Hermann Wessels, Uwe Ohler
Bioinformatics (Oxford, England)|July 29, 2006
Informative priors based on transcription factor structural class improve de novo motif discoveryLeelavati Narlikar, Raluca Gordân, Uwe Ohler, et al.
Methods in Molecular Biology (Clifton, N.J.)|October 15, 2015
Identifying RBP Targets with RIP-seqHans-Herman Wessels, Antje Hirsekorn, Uwe Ohler, et al.
BMC Bioinformatics|June 6, 2006
Optimized mixed Markov models for motif identificationWeichun Huang, David M Umbach, Uwe Ohler, et al.
Bioinformatics (Oxford, England)|March 25, 2014
Improved transcript isoform discovery using ORF graphsWilliam H Majoros, Niel Lebeck, Uwe Ohler, et al.
Developmental Biology|October 19, 2006
Detection of broadly expressed neuronal genes in C. elegansIlya Ruvinsky, Uwe Ohler, Christopher B Burge, et al.
BMC Medical Informatics and Decision Making|February 4, 2022
Deep learning for prediction of population health costsPhilipp Drewe-Boss, Dirk Enders, Jochen Walker, et al.
BMC Bioinformatics|January 5, 2017
JACUSA: site-specific identification of RNA editing events from replicate sequencing dataMichael Piechotta, Emanuel Wyler, Uwe Ohler, et al.
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