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IEEE Access : Practical Innovations, Open Solutions|April 25, 2022
LINA: A Linearizing Neural Network Architecture for Accurate First-Order and Second-Order InterpretationsAdrien Badré, Chongle PanPlos Computational Biology|July 7, 2023
Explainable multi-task learning improves the parallel estimation of polygenic risk scores for many diseases through shared genetic basisAdrien Badré, Chongle PanBioinformatics (Oxford, England)|May 15, 2012
Exhaustive database searching for amino acid mutations in proteomesDoug Hyatt, Chongle PanPlos Computational Biology|December 5, 2025
Benchmarking interpretability of deep learning for predictive genomics: Recall, precision, and variability of feature attributionJustin Reynolds, Chongle PanThe ISME Journal|August 12, 2017
Phylogenetically conserved resource partitioning in the coastal microbial loopSamuel Bryson, Zhou Li, Francisco Chavez, et al.Environmental Microbiology|April 27, 2011
Proteome changes in the initial bacterial colonist during ecological succession in an acid mine drainage biofilm communityRyan S Mueller, Brian D Dill, Chongle Pan, et al.Analytical Chemistry|May 14, 2005
Multipole-storage-assisted dissociation for the characterization of large proteins and simple protein mixtures by ESI-FTICR-MSChongle Pan, Robert L HettichMethods in Molecular Biology (Clifton, N.J.)|February 12, 2014
Quantitative metaproteomics: functional insights into microbial communitiesChongle Pan, Jillian F BanfieldProceedings. IEEE International Conference on Bioinformatics and Biomedicine|April 10, 2023
IDIA: An Integrative Signal Extractor for Data-Independent Acquisition ProteomicsJiancheng Li, Chongle Pan, Xuan GuoBioinformatics (Oxford, England)|October 1, 2014
Sigma: strain-level inference of genomes from metagenomic analysis for biosurveillanceTae-Hyuk Ahn, Juanjuan Chai, Chongle PanPageof 15