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Sam Kovaka

Showing results (1-10 of 12) with videos related to

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Nature Methods|January 12, 2023
Approaching complete genomes, transcriptomes and epi-omes with accurate long-read sequencingSam Kovaka, Shujun Ou, Katharine M Jenike, et al.
Nature Biotechnology|December 1, 2020
Targeted nanopore sequencing by real-time mapping of raw electrical signal with UNCALLEDSam Kovaka, Yunfan Fan, Bohan Ni, et al.
Biorxiv : the Preprint Server for Biology|August 30, 2023
Sigmoni: classification of nanopore signal with a compressed pangenome indexVikram S Shivakumar, Omar Y Ahmed, Sam Kovaka, et al.
Bioinformatics (Oxford, England)|June 28, 2024
Sigmoni: classification of nanopore signal with a compressed pangenome indexVikram S Shivakumar, Omar Y Ahmed, Sam Kovaka, et al.
Genome Biology|December 18, 2019
Transcriptome assembly from long-read RNA-seq alignments with StringTie2Sam Kovaka, Aleksey V Zimin, Geo M Pertea, et al.
Iscience|July 1, 2021
Pan-genomic matching statistics for targeted nanopore sequencingOmar Ahmed, Massimiliano Rossi, Sam Kovaka, et al.
Biorxiv : the Preprint Server for Biology|June 3, 2024
MEM-based pangenome indexing for <i>k</i>-mer queriesStephen Hwang, Nathaniel K Brown, Omar Y Ahmed, et al.
Algorithms for Molecular Biology : AMB|March 2, 2025
Mem-based pangenome indexing for k-mer queriesStephen Hwang, Nathaniel K Brown, Omar Y Ahmed, et al.
Biorxiv : the Preprint Server for Biology|March 18, 2024
Uncalled4 improves nanopore DNA and RNA modification detection via fast and accurate signal alignmentSam Kovaka, Paul W Hook, Katharine M Jenike, et al.
Nature Methods|March 29, 2025
Uncalled4 improves nanopore DNA and RNA modification detection via fast and accurate signal alignmentSam Kovaka, Paul W Hook, Katharine M Jenike, et al.
Pageof 2

Showing results (1-10 of 12) with videos related to

Sort By:
Pageof 2
Nature Methods|January 12, 2023
Approaching complete genomes, transcriptomes and epi-omes with accurate long-read sequencingSam Kovaka, Shujun Ou, Katharine M Jenike, et al.
Nature Biotechnology|December 1, 2020
Targeted nanopore sequencing by real-time mapping of raw electrical signal with UNCALLEDSam Kovaka, Yunfan Fan, Bohan Ni, et al.
Biorxiv : the Preprint Server for Biology|August 30, 2023
Sigmoni: classification of nanopore signal with a compressed pangenome indexVikram S Shivakumar, Omar Y Ahmed, Sam Kovaka, et al.
Bioinformatics (Oxford, England)|June 28, 2024
Sigmoni: classification of nanopore signal with a compressed pangenome indexVikram S Shivakumar, Omar Y Ahmed, Sam Kovaka, et al.
Genome Biology|December 18, 2019
Transcriptome assembly from long-read RNA-seq alignments with StringTie2Sam Kovaka, Aleksey V Zimin, Geo M Pertea, et al.
Iscience|July 1, 2021
Pan-genomic matching statistics for targeted nanopore sequencingOmar Ahmed, Massimiliano Rossi, Sam Kovaka, et al.
Biorxiv : the Preprint Server for Biology|June 3, 2024
MEM-based pangenome indexing for <i>k</i>-mer queriesStephen Hwang, Nathaniel K Brown, Omar Y Ahmed, et al.
Algorithms for Molecular Biology : AMB|March 2, 2025
Mem-based pangenome indexing for k-mer queriesStephen Hwang, Nathaniel K Brown, Omar Y Ahmed, et al.
Biorxiv : the Preprint Server for Biology|March 18, 2024
Uncalled4 improves nanopore DNA and RNA modification detection via fast and accurate signal alignmentSam Kovaka, Paul W Hook, Katharine M Jenike, et al.
Nature Methods|March 29, 2025
Uncalled4 improves nanopore DNA and RNA modification detection via fast and accurate signal alignmentSam Kovaka, Paul W Hook, Katharine M Jenike, et al.
Pageof 2