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Bioinformatics (Oxford, England)|July 14, 2020
PEDL: extracting protein-protein associations using deep language models and distant supervisionLeon Weber, Kirsten Thobe, Oscar Arturo Migueles Lozano, et al.
Bioinformatics (Oxford, England)|February 21, 2024
preon: Fast and accurate entity normalization for drug names and cancer types in precision oncologyArik Ermshaus, Michael Piechotta, Gina Rüter, et al.
Briefings in Bioinformatics|July 31, 2016
Comparative assessment of differential network analysis methodsYvonne Lichtblau, Karin Zimmermann, Berit Haldemann, et al.
Genome Biology|October 18, 2008
Gene mention normalization and interaction extraction with context models and sentence motifsJörg Hakenberg, Conrad Plake, Loic Royer, et al.
Molecular Endocrinology (Baltimore, Md.)|November 18, 2006
Implications for molecular mechanisms of glycoprotein hormone receptors using a new sequence-structure-function analysis resourceGunnar Kleinau, Mara Brehm, Urs Wiedemann, et al.
Bioinformatics (Oxford, England)|January 28, 2021
HunFlair: an easy-to-use tool for state-of-the-art biomedical named entity recognitionLeon Weber, Mario Sänger, Jannes Münchmeyer, et al.
BMC Medical Informatics and Decision Making|November 23, 2018
Variant information systems for precision oncologyJohannes Starlinger, Steffen Pallarz, Jurica Ševa, et al.
Bioinformatics (Oxford, England)|November 11, 2023
PEDL+: protein-centered relation extraction from PubMed at your fingertipLeon Weber, Fabio Barth, Leonie Lorenz, et al.
BMC Bioinformatics|June 18, 2005
Systematic feature evaluation for gene name recognitionJörg Hakenberg, Steffen Bickel, Conrad Plake, et al.
Plos One|May 7, 2015
Assembly of a comprehensive regulatory network for the mammalian circadian clock: a bioinformatics approachRobert Lehmann, Liam Childs, Philippe Thomas, et al.
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