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Analytical Chemistry|December 15, 2004
Shotgun protein sequencing by tandem mass spectra assemblyNuno Bandeira, Haixu Tang, Vineet Bafna, et al.Journal of Proteome Research|August 9, 2005
Peptide sequence tags for fast database search in mass-spectrometryAri Frank, Stephen Tanner, Vineet Bafna, et al.BMC Bioinformatics|February 24, 2011
Strobe sequence design for haplotype assemblyChristine Lo, Ali Bashir, Vikas Bansal, et al.Journal of Computational Biology : a Journal of Computational Molecular Cell Biology|August 26, 2003
Haplotyping as perfect phylogeny: a direct approachVineet Bafna, Dan Gusfield, Giuseppe Lancia, et al.Journal of Computational Biology : a Journal of Computational Molecular Cell Biology|February 11, 2005
A note on efficient computation of haplotypes via perfect phylogenyVineet Bafna, Dan Gusfield, Sridhar Hannenhalli, et al.IEEE/ACM Transactions on Computational Biology and Bioinformatics|May 19, 2010
TCLUST: a fast method for clustering genome-scale expression dataBanu Dost, Chunlei Wu, Andrew Su, et al.IEEE/ACM Transactions on Computational Biology and Bioinformatics|October 19, 2006
Searching genomes for noncoding RNA using FastRShaojie Zhang, Brian Haas, Eleazar Eskin, et al.Molecular Ecology Resources|January 17, 2020
The impact of contaminants on the accuracy of genome skimming and the effectiveness of exclusion read filtersEleonora Rachtman, Metin Balaban, Vineet Bafna, et al.Bioinformatics (Oxford, England)|June 12, 2013
Using Genome Query Language to uncover genetic variationChristos Kozanitis, Andrew Heiberg, George Varghese, et al.Genetics|April 12, 2017
Clear: Composition of Likelihoods for Evolve and Resequence ExperimentsArya Iranmehr, Ali Akbari, Christian Schlötterer, et al.Pageof 21