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Angewandte Chemie (International Ed. in English)|February 16, 2019
Atomic Resolution Insight into Sac7d Protein Binding to DNA and Associated Global Changes by Molecular Dynamics SimulationsMartin ZachariasProtein Science : a Publication of the Protein Society|October 14, 2021
Match_Motif: A rapid computational tool to assist in protein-protein interaction designMartin ZachariasThe Journal of Physical Chemistry. B|November 6, 2020
Base-Pairing and Base-Stacking Contributions to Double-Stranded DNA FormationMartin ZachariasJournal of Chemical Theory and Computation|December 2, 2015
Combining Elastic Network Analysis and Molecular Dynamics Simulations by Hamiltonian Replica ExchangeMartin ZachariasStructure (London, England : 1993)|March 9, 2017
Predicting Allosteric Changes from Conformational EnsemblesMartin ZachariasProtein Science : a Publication of the Protein Society|May 23, 2003
Protein-protein docking with a reduced protein model accounting for side-chain flexibilityMartin ZachariasBiophysical Journal|May 16, 2006
Minor groove deformability of DNA: a molecular dynamics free energy simulation studyMartin ZachariasProteins|March 5, 2004
Rapid protein-ligand docking using soft modes from molecular dynamics simulations to account for protein deformability: binding of FK506 to FKBPMartin ZachariasCurrent Opinion in Structural Biology|March 3, 2010
Accounting for conformational changes during protein-protein dockingMartin ZachariasBiopolymers|November 11, 2014
Influence of a cis,syn-cyclobutane pyrimidine dimer damage on DNA conformation studied by molecular dynamics simulationsAlexander Knips, Martin ZachariasPageof 38