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Trends in Genetics : TIG|October 28, 2008
Evolutionary footprints of nucleosome positions in yeastStefan Washietl, Rainer Machné, Nick GoldmanBioinformatics (Oxford, England)|June 6, 2018
PREQUAL: detecting non-homologous characters in sets of unaligned homologous sequencesSimon Whelan, Iker Irisarri, Fabien BurkiJournal of Biomedical Informatics|October 18, 2005
Phylogenetics by likelihood: evolutionary modeling as a tool for understanding the genomeCarolin Kosiol, Lee Bofkin, Simon WhelanMethods in Molecular Biology (Clifton, N.J.)|December 8, 2020
Automated Removal of Non-homologous Sequence Stretches with PREQUALIker Irisarri, Fabien Burki, Simon WhelanF1000Research|May 1, 2018
Improving communication for interdisciplinary teams working on storage of digital information in DNAEmily E Hesketh, Jossy Sayir, Nick GoldmanJournal of Theoretical Biology|April 6, 2004
A new criterion and method for amino acid classificationCarolin Kosiol, Nick Goldman, Nigel H ButtimoreBioinformatics (Oxford, England)|April 26, 2012
Accurate extension of multiple sequence alignments using a phylogeny-aware graph algorithmAri Löytynoja, Albert J Vilella, Nick GoldmanDevelopmental Dynamics : an Official Publication of the American Association of Anatomists|October 29, 2010
Dynamic expression patterns of 6-O endosulfatases during zebrafish development suggest a subfunctionalisation event for sulf2Bushra Gorsi, Simon Whelan, Sally E StringerMolecular Biology and Evolution|May 7, 2015
Covariation Is a Poor Measure of Molecular CoevolutionDavid Talavera, Simon C Lovell, Simon WhelanMolecular Biology and Evolution|June 19, 2019
Identifying Clusters of High Confidence Homologies in Multiple Sequence AlignmentsRaja Hashim Ali, Marcin Bogusz, Simon WhelanPageof 12