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Journal of Mathematical Biology|December 29, 2009
Analyzing and reconstructing reticulation networks under timing constraintsSimone Linz, Charles Semple, Tanja StadlerBulletin of Mathematical Biology|September 24, 2014
Phylogenetic networks that display a tree twicePaul Cordue, Simone Linz, Charles SempleJournal of Computational Biology : a Journal of Computational Molecular Cell Biology|January 8, 2011
Quantifying hybridization in realistic timeJoshua Collins, Simone Linz, Charles SempleMolecular Biology and Evolution|March 22, 2007
A likelihood framework to measure horizontal gene transferSimone Linz, Achim Radtke, Arndt von HaeselerBulletin of Mathematical Biology|August 9, 2013
Cherry picking: a characterization of the temporal hybridization number for a set of phylogeniesPeter J Humphries, Simone Linz, Charles SempleJournal of Mathematical Biology|March 26, 2021
The rigid hybrid number for two phylogenetic treesKatharina T Huber, Simone Linz, Vincent MoultonJournal of Mathematical Biology|May 3, 2022
Classes of explicit phylogenetic networks and their biological and mathematical significanceSungsik Kong, Joan Carles Pons, Laura Kubatko, et al.Visual Computing for Industry, Biomedicine, and Art|May 17, 2020
Classes of tree-based networksMareike Fischer, Michelle Galla, Lina Herbst, et al.Algorithms for Molecular Biology : AMB|July 27, 2025
NANUQ+: A divide-and-conquer approach to network estimationElizabeth S Allman, Hector Baños, John A Rhodes, et al.IEEE/ACM Transactions on Computational Biology and Bioinformatics|July 27, 2011
The complexity of finding multiple solutions to betweenness and quartet compatibilityMaria Luisa Bonet, Simone Linz, Katherine St JohnPageof 4