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Elife|April 23, 2021
Transcriptional profiling of mouse peripheral nerves to the single-cell level to build a sciatic nerve ATlas (SNAT)Daniel Gerber, Jorge A Pereira, Joanne Gerber, et al.Plos One|July 14, 2010
MER41 repeat sequences contain inducible STAT1 binding sitesChristoph D Schmid, Philipp BucherScience Advances|January 17, 2025
Biologically relevant integration of transcriptomics profiles from cancer cell lines, patient-derived xenografts, and clinical tumors using deep learningSlavica Dimitrieva, Rens Janssens, Gang Li, et al.Nucleic Acids Research|December 19, 2003
CleanEx: a database of heterogeneous gene expression data based on a consistent gene nomenclatureViviane Praz, Vidhya Jagannathan, Philipp BucherPlos Computational Biology|October 8, 2016
Influence of Rotational Nucleosome Positioning on Transcription Start Site Selection in Animal PromotersRené Dreos, Giovanna Ambrosini, Philipp BucherBioinformatics (Oxford, England)|March 8, 2018
PWMScan: a fast tool for scanning entire genomes with a position-specific weight matrixGiovanna Ambrosini, Romain Groux, Philipp BucherNucleic Acids Research|December 1, 2016
SNP2TFBS - a database of regulatory SNPs affecting predicted transcription factor binding site affinitySunil Kumar, Giovanna Ambrosini, Philipp BucherMolecular & Cellular Proteomics : MCP|April 13, 2019
Sensitive Quantitative Proteomics of Human Hematopoietic Stem and Progenitor Cells by Data-independent Acquisition Mass SpectrometrySabine Amon, Fabienne Meier-Abt, Ludovic C Gillet, et al.Nucleic Acids Research|December 26, 2001
The Eukaryotic Promoter Database, EPD: new entry types and links to gene expression dataViviane Praz, Rouaïda Périer, Claude Bonnard, et al.BMC Genomics|November 20, 2016
The ChIP-Seq tools and web server: a resource for analyzing ChIP-seq and other types of genomic dataGiovanna Ambrosini, René Dreos, Sunil Kumar, et al.Pageof 9