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Bioinformatics (Oxford, England)|February 5, 2009
Lightweight comparison of RNAs based on exact sequence-structure matchesSteffen Heyne, Sebastian Will, Michael Beckstette, et al.BMC Bioinformatics|May 31, 2011
Structator: fast index-based search for RNA sequence-structure patternsFernando Meyer, Stefan Kurtz, Rolf Backofen, et al.Nucleic Acids Research|May 7, 2010
Freiburg RNA Tools: a web server integrating INTARNA, EXPARNA and LOCARNACameron Smith, Steffen Heyne, Andreas S Richter, et al.BMC Bioinformatics|January 1, 2015
ExpaRNA-P: simultaneous exact pattern matching and folding of RNAsChristina Otto, Mathias Möhl, Steffen Heyne, et al.Algorithms for Molecular Biology : AMB|April 23, 2013
LocARNAscan: Incorporating thermodynamic stability in sequence and structure-based RNA homology searchSebastian Will, Michael F Siebauer, Steffen Heyne, et al.IEEE/ACM Transactions on Computational Biology and Bioinformatics|September 11, 2015
Local Exact Pattern Matching for Non-Fixed RNA StructuresMika Amit, Rolf Backofen, Steffen Heyne, et al.Journal of Bioinformatics and Computational Biology|December 24, 2004
Local sequence-structure motifs in RNARolf Backofen, Sebastian WillBioinformatics (Oxford, England)|June 13, 2012
GraphClust: alignment-free structural clustering of local RNA secondary structuresSteffen Heyne, Fabrizio Costa, Dominic Rose, et al.BMC Bioinformatics|May 9, 2008
CPSP-tools--exact and complete algorithms for high-throughput 3D lattice protein studiesMartin Mann, Sebastian Will, Rolf BackofenBioinformatics (Oxford, England)|May 28, 2005
SECISDesign: a server to design SECIS-elements within the coding sequenceAnke Busch, Sebastian Will, Rolf BackofenPageof 37