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BMC Systems Biology|July 4, 2012
Efficient parametric analysis of the chemical master equation through model order reductionSteffen Waldherr, Bernard HaasdonkIEEE Transactions on Pattern Analysis and Machine Intelligence|April 18, 2009
Kernel discriminant analysis for positive definite and indefinite kernelsElzbieta Pekalska, Bernard HaasdonkJournal of the Royal Society, Interface|November 2, 2018
Estimation methods for heterogeneous cell population models in systems biologySteffen WaldherrThe Journal of Physical Chemistry. A|October 17, 2019
Gaussian Process Regression for Minimum Energy Path Optimization and Transition State SearchAlexander Denzel, Bernard Haasdonk, Johannes KästnerBiotechnology and Bioengineering|March 27, 2018
Optimization of bioprocess productivity based on metabolic-genetic network models with bilevel dynamic programmingBanafsheh Jabarivelisdeh, Steffen WaldherrInternational Journal for Numerical Methods in Biomedical Engineering|May 8, 2018
Numerical modelling of a peripheral arterial stenosis using dimensionally reduced models and kernel methodsTobias Koeppl, Gabriele Santin, Bernard Haasdonk, et al.PMC Biophysics|November 19, 2009
Amplitude distribution of stochastic oscillations in biochemical networks due to intrinsic noiseMoritz Lang, Steffen Waldherr, Frank AllgöwerNPJ Systems Biology and Applications|November 23, 2024
Network structure and fluctuation data improve inference of metabolic interaction strengths with the inverse JacobianJiahang Li, Wolfram Weckwerth, Steffen WaldherrBioinformatics (Oxford, England)|July 4, 2023
COVRECON: automated integration of genome- and metabolome-scale network reconstruction and data-driven inverse modeling of metabolic interaction networksJiahang Li, Steffen Waldherr, Wolfram WeckwerthJournal of Mathematical Biology|June 3, 2026
Modelling the effect of antibody depletion for dose-response behavior of common immunostaining protocolsDominik Tschimmel, Tim Hucho, Steffen WaldherrPageof 4