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Biorxiv : the Preprint Server for Biology|January 20, 2025
Evolutionary sparse learning with paired species contrast reveals the shared genetic basis of convergent traitsJohn B Allard, Sudip Sharma, Ravi Patel, et al.Nature Communications|April 4, 2025
Evolutionary sparse learning reveals the shared genetic basis of convergent traitsJohn B Allard, Sudip Sharma, Ravi Patel, et al.Briefings in Bioinformatics|July 21, 2004
MEGA3: Integrated software for Molecular Evolutionary Genetics Analysis and sequence alignmentSudhir Kumar, Koichiro Tamura, Masatoshi NeiMolecular Biology and Evolution|March 24, 2016
MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger DatasetsSudhir Kumar, Glen Stecher, Koichiro TamuraProceedings of the National Academy of Sciences of the United States of America|July 20, 2004
Prospects for inferring very large phylogenies by using the neighbor-joining methodKoichiro Tamura, Masatoshi Nei, Sudhir KumarMolecular Biology and Evolution|April 23, 2021
MEGA11: Molecular Evolutionary Genetics Analysis Version 11Koichiro Tamura, Glen Stecher, Sudhir KumarMolecular Biology and Evolution|September 2, 2003
Temporal patterns of fruit fly (Drosophila) evolution revealed by mutation clocksKoichiro Tamura, Sankar Subramanian, Sudhir KumarMolecular Biology and Evolution|June 13, 2018
Theoretical Foundation of the RelTime Method for Estimating Divergence Times from Variable Evolutionary RatesKoichiro Tamura, Qiqing Tao, Sudhir KumarMolecular Biology and Evolution|January 7, 2020
Molecular Evolutionary Genetics Analysis (MEGA) for macOSGlen Stecher, Koichiro Tamura, Sudhir KumarFrontiers in Bioinformatics|August 21, 2023
Molecular timetrees using relaxed clocks and uncertain phylogeniesJose Barba-Montoya, Sudip Sharma, Sudhir KumarPageof 136