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Scientific Reports|January 31, 2018
Communication between the leaflets of asymmetric membranes revealed from coarse-grain molecular dynamics simulationsJonathan Shearer, Syma KhalidThe Journal of Physical Chemistry. B|March 7, 2019
Movement of Arginine through OprD: The Energetics of Permeation and the Role of Lipopolysaccharide in Directing Arginine to the ProteinFirdaus Samsudin, Syma KhalidAnnual Review of Physical Chemistry|February 20, 2020
Molecular Simulations of Gram-Negative Bacterial Membranes Come of AgeWonpil Im, Syma KhalidMethods (San Diego, Calif.)|February 22, 2020
Atomistic and coarse-grained simulations of membrane proteins: A practical guideDamien Jefferies, Syma KhalidBiophysical Journal|November 25, 2014
Atomistic molecular-dynamics simulations enable prediction of the arginine permeation pathway through OccD1/OprD from Pseudomonas aeruginosaJamie Parkin, Syma KhalidJournal of Molecular Biology|January 14, 2020
To infect or not to infect: molecular determinants of bacterial outer membrane vesicle internalization by host membranesDamien Jefferies, Syma KhalidCommunications Biology|December 5, 2025
Polymyxins slow down lateral diffusion of proteins and lipopolysaccharide in the E. coli outer membraneDheeraj Prakaash, Syma KhalidCurrent Opinion in Structural Biology|February 2, 2020
Simulation of subcellular structuresSyma Khalid, Sarah L RousePlos Computational Biology|January 13, 2023
Conformational dynamics and putative substrate extrusion pathways of the N-glycosylated outer membrane factor CmeC from Campylobacter jejuniKahlan E Newman, Syma KhalidThe Journal of Physical Chemistry. B|April 12, 2019
Role of O-Antigen in Response to Mechanical Stress of the E. coli Outer Membrane: Insights from Coarse-Grained MD SimulationsDamien Jefferies, Jonathan Shearer, Syma KhalidPageof 29