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Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics|May 23, 2006
Elasticity of peptide omega bondsTongye Shen, Donald Hamelberg, J Andrew McCammonJournal of Chemical Information and Modeling|July 4, 2019
Establishing a Framework of Using Residue-Residue Interactions in Protein Difference Network AnalysisXin-Qiu Yao, Mohamed Momin, Donald HamelbergJournal of Chemical Theory and Computation|May 23, 2009
Replica-Exchange Accelerated Molecular Dynamics (REXAMD) Applied to Thermodynamic IntegrationMikolai Fajer, Donald Hamelberg, J Andrew McCammonThe Journal of Physical Chemistry. B|March 29, 2023
Conserved Conformational Dynamics Reveal a Key Dynamic Residue in the Gatekeeper Loop of Human CyclophilinsFuryal Ahmed, Xin-Qiu Yao, Donald HamelbergJournal of Chemical Information and Modeling|June 30, 2018
Elucidating Allosteric Communications in Proteins with Difference Contact Network AnalysisXin-Qiu Yao, Mohamed Momin, Donald HamelbergProceedings. IEEE Computer Society Bioinformatics Conference|February 3, 2006
Experimental studies of the Universal Chemical Key (UCK) algorithm on the NCI database of chemical compoundsRobert Grossman, Pavan Kasturi, Donald Hamelberg, et al.Journal of the American Chemical Society|October 18, 2011
Insights on the mechanism of amine oxidation catalyzed by D-arginine dehydrogenase through pH and kinetic isotope effectsHongling Yuan, Yao Xin, Donald Hamelberg, et al.Biochemistry|February 25, 2016
Role of F357 as an Oxygen Gate in the Oxidative Half-Reaction of Choline OxidaseFrancesca Salvi, Isela Rodriguez, Donald Hamelberg, et al.Journal of Bioinformatics and Computational Biology|July 24, 2004
An empirical study of the universal chemical key algorithm for assigning unique keys to chemical compoundsRobert Grossman, Pavan Kasturi, Donald Hamelberg, et al.Nucleic Acids Research|August 15, 2002
Effect of a neutralized phosphate backbone on the minor groove of B-DNA: molecular dynamics simulation studiesDonald Hamelberg, Loren Dean Williams, W David WilsonPageof 11