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Proceedings of the National Academy of Sciences of the United States of America|April 23, 2008
A dry ligand-binding cavity in a solvated proteinJohan Qvist, Monika Davidovic, Donald Hamelberg, et al.Molecular Physics|May 20, 2026
Subsets of adjacent nodes (SOAN): A fast method for computing suboptimal paths in protein dynamic networksThomas Dodd, Xin-Qiu Yao, Donald Hamelberg, et al.Biopolymers|February 23, 2007
Comparative MD analysis of the stability of transthyretin providing insight into the fibrillation mechanismJesper Sørensen, Donald Hamelberg, Birgit Schiøtt, et al.The Journal of Physical Chemistry. B|June 1, 2018
Substrate Sequence Determines Catalytic Activities, Domain-Binding Preferences, and Allosteric Mechanisms in Pin1Mohamed Momin, Xin-Qiu Yao, Waygen Thor, et al.The Journal of Chemical Physics|October 24, 2007
Accelerated entropy estimates with accelerated dynamicsDavid D L Minh, Donald Hamelberg, J Andrew McCammonBiochemistry|July 13, 2006
Dynamics, energetics, and structure in protein foldingAthi N Naganathan, Urmi Doshi, Adam Fung, et al.Archives of Biochemistry and Biophysics|November 22, 2005
Mapping the tropomyosin isoform 5 binding site on human erythrocyte tropomodulin: further insights into E-Tmod/TM5 interactionCarlos Vera, Jianmin Lao, Donald Hamelberg, et al.Biochimica Et Biophysica Acta|January 14, 2015
Computational perspective and evaluation of plausible catalytic mechanisms of peptidyl-prolyl cis-trans isomerasesSafieh Tork Ladani, Michael G Souffrant, Arghya Barman, et al.The Journal of Chemical Physics|April 17, 2012
High-pressure effect on the dynamics of solvated peptidesRicky B Nellas, Mary M Glover, Donald Hamelberg, et al.Journal of Chemical Information and Modeling|December 15, 2015
Conserved Hydration Sites in Pin1 Reveal a Distinctive Water Recognition Motif in ProteinsArghya Barman, Crystal Smitherman, Michael Souffrant, et al.Pageof 11