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Microbiome|August 16, 2017
MetaMeta: integrating metagenome analysis tools to improve taxonomic profilingVitor C Piro, Marcel Matschkowski, Bernhard Y RenardNucleic Acids Research|January 30, 2013
Fast and accurate read mapping with approximate seeds and multiple backtrackingEnrico Siragusa, David Weese, Knut ReinertJournal of Computational Biology : a Journal of Computational Molecular Cell Biology|September 5, 2013
The duplication-loss small phylogeny problem: from cherries to treesSandro Andreotti, Knut Reinert, Stefan CanzarBioinformatics (Oxford, England)|February 5, 2015
Methods for the detection and assembly of novel sequence in high-throughput sequencing dataManuel Holtgrewe, Leon Kuchenbecker, Knut ReinertBioinformatics (Oxford, England)|August 28, 2012
RazerS 3: faster, fully sensitive read mappingDavid Weese, Manuel Holtgrewe, Knut ReinertBioinformatics (Oxford, England)|December 17, 2013
NetCoffee: a fast and accurate global alignment approach to identify functionally conserved proteins in multiple networksJialu Hu, Birte Kehr, Knut ReinertBMC Bioinformatics|December 14, 2011
STELLAR: fast and exact local alignmentsBirte Kehr, David Weese, Knut ReinertBioinformatics (Oxford, England)|July 17, 2014
Journaled string tree-a scalable data structure for analyzing thousands of similar genomes on your laptopRené Rahn, David Weese, Knut ReinertBioinformatics (Oxford, England)|August 28, 2014
Lambda: the local aligner for massive biological dataHannes Hauswedell, Jochen Singer, Knut ReinertBioinformatics (Oxford, England)|May 7, 2016
DUDes: a top-down taxonomic profiler for metagenomicsVitor C Piro, Martin S Lindner, Bernhard Y RenardPageof 12