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Journal of Chemical Information and Modeling|January 29, 2019
Calculating Single-Channel Permeability and Conductance from Transition PathsXiaoyan Zhou, Fangqiang ZhuThe Journal of Chemical Physics|April 8, 2017
Calculating transition rates from durations of transition pathsFangqiang ZhuBiophysical Journal|June 28, 2003
Water and proton conduction through carbon nanotubes as models for biological channelsFangqiang Zhu, Klaus SchultenProceedings of the National Academy of Sciences of the United States of America|November 3, 2010
Pore opening and closing of a pentameric ligand-gated ion channelFangqiang Zhu, Gerhard HummerJournal of Molecular Graphics & Modelling|December 3, 2014
Evaluating membrane affinity by integrating protein orientationsFangqiang Zhu, Matthias ClaussJournal of Computational Chemistry|November 24, 2011
Convergence and error estimation in free energy calculations using the weighted histogram analysis methodFangqiang Zhu, Gerhard HummerBiophysical Journal|February 28, 2013
Collective diffusion model for ion conduction through microscopic channelsYingting Liu, Fangqiang ZhuThe Journal of Physical Chemistry. B|January 22, 2024
Hexagonal Lattices of HIV Capsid Proteins Explored by Simulations Based on a Thermodynamically Consistent ModelHao Sha, Fangqiang ZhuBiophysical Journal|November 4, 2009
Gating transition of pentameric ligand-gated ion channelsFangqiang Zhu, Gerhard HummerJournal of Chemical Information and Modeling|June 25, 2015
Monte Carlo Simulations of HIV Capsid Protein HomodimerFangqiang Zhu, Bo ChenPageof 74