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Structure (London, England : 1993)|September 26, 2025
Flexibility or uncertainty? A critical assessment of AlphaFold 2 pLDDTYann Vander Meersche, Julien Diharce, Jean-Christophe Gelly, et al.Nucleic Acids Research|November 21, 2023
ATLAS: protein flexibility description from atomistic molecular dynamics simulationsYann Vander Meersche, Gabriel Cretin, Aria Gheeraert, et al.Briefings in Bioinformatics|March 22, 2023
Poincaré maps for visualization of large protein familiesAnna Klimovskaia Susmelj, Yani Ren, Yann Vander Meersche, et al.Journal of Molecular Biology|May 11, 2021
MEDUSA: Prediction of Protein Flexibility from SequenceYann Vander Meersche, Gabriel Cretin, Alexandre G de Brevern, et al.Protein Science : a Publication of the Protein Society|July 17, 2025
PEGASUS: Prediction of MD-derived protein flexibility from sequenceYann Vander Meersche, Gabriel Duval, Gabriel Cretin, et al.Nucleic Acids Research|May 17, 2022
SWORD2: hierarchical analysis of protein 3D structuresGabriel Cretin, Tatiana Galochkina, Yann Vander Meersche, et al.Nucleic Acids Research|October 22, 2024
DIONYSUS: a database of protein-carbohydrate interfacesAria Gheeraert, Thomas Bailly, Yani Ren, et al.Pageof 1