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Methods (San Diego, Calif.)|September 30, 2015
Mislocalization-related disease gene discovery using gene expression based computational protein localization predictionZhonghao Liu, Jianjun HuProteins|July 22, 2014
Computational identification of post-translational modification-based nuclear import regulations by characterizing nuclear localization signal-import receptor interactionJhih-Rong Lin, Zhonghao Liu, Jianjun HuMedical & Biological Engineering & Computing|July 27, 2019
A deep learning algorithm for one-step contour aware nuclei segmentation of histopathology imagesYuxin Cui, Guiying Zhang, Zhonghao Liu, et al.Scientific Reports|January 30, 2019
DeepSeqPan, a novel deep convolutional neural network model for pan-specific class I HLA-peptide binding affinity predictionZhonghao Liu, Yuxin Cui, Zheng Xiong, et al.ACS Omega|March 3, 2020
Machine Learning-Based Prediction of Crystal Systems and Space Groups from Inorganic Materials CompositionsYong Zhao, Yuxin Cui, Zheng Xiong, et al.IEEE/ACM Transactions on Computational Biology and Bioinformatics|April 22, 2021
DeepSeqPanII: An Interpretable Recurrent Neural Network Model With Attention Mechanism for Peptide-HLA Class II Binding PredictionZhonghao Liu, Jing Jin, Yuxin Cui, et al.Proteins|February 17, 2021
Deep learning pan-specific model for interpretable MHC-I peptide binding prediction with improved attention mechanismJing Jin, Zhonghao Liu, Alireza Nasiri, et al.Proteins|June 6, 2013
DNABind: a hybrid algorithm for structure-based prediction of DNA-binding residues by combining machine learning- and template-based approachesRong Liu, Jianjun HuBMC Bioinformatics|February 4, 2010
BayesMotif: de novo protein sorting motif discovery from impure datasetsJianjun Hu, Fan ZhangBMC Bioinformatics|May 27, 2011
HemeBIND: a novel method for heme binding residue prediction by combining structural and sequence informationRong Liu, Jianjun HuPageof 37