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Scientific Reports|September 19, 2023
Recovery of the gut microbiome following enteric infection and persistence of antimicrobial resistance genes in specific microbial hostsZoe A Hansen, Karla Vasco, James T Rudrik, et al.
The ISME Journal|May 23, 2026
Subinhibitory concentrations of antibiotics mediate primary metabolism and shape diverse species interactions among coevolved soil StreptomycesMolly A Kuhs, Zoe A Hansen, Matthew J Michalska-Smith, et al.
Frontiers in Cellular and Infection Microbiology|May 23, 2024
Shifts in the functional capacity and metabolite composition of the gut microbiome during recovery from enteric infectionZoe A Hansen, Anthony L Schilmiller, Douglas V Guzior, et al.
Scientific Reports|November 17, 2021
Comparing gut resistome composition among patients with acute Campylobacter infections and healthy family membersZoe A Hansen, Wonhee Cha, Brian Nohomovich, et al.
The ISME Journal|August 20, 2021
Network structure of resource use and niche overlap within the endophytic microbiomeMatthew Michalska-Smith, Zewei Song, Seth A Spawn-Lee, et al.
Frontiers in Molecular Biosciences|June 5, 2024
Untargeted metabolomics and metagenomics reveal signatures for intramammary ceftiofur treatment and lactation stage in the cattle hindgutKarla A Vasco, Zoe A Hansen, Anthony L Schilmiller, et al.
ISME Communications|November 25, 2024
Soil nutrient amendment increases the potential for inter-kingdom resource competition among foliar endophytesZoe A Hansen, Michael R Fulcher, Nicholas Wornson, et al.
Nature Ecology & Evolution|March 14, 2023
Peer review perpetuates barriers for historically excluded groupsOlivia M Smith, Kayla L Davis, Riley B Pizza, et al.
Environmental Microbiome|April 19, 2025
Microbiome data management in action workshop: Atlanta, GA, USA, June 12-13, 2024Julia M Kelliher, Mashael Aljumaah, Sarah R Bordenstein, et al.
Nature Microbiology|December 1, 2025
STREAMS guidelines: standards for technical reporting in environmental and host-associated microbiome studiesJulia M Kelliher, Chloe Mirzayi, Sarah R Bordenstein, et al.
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