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BMC Bioinformatics|February 18, 2025
A Dirichlet-multinomial mixed model for determining differential abundance of mutational signaturesLena Morrill Gavarró, Dominique-Laurent Couturier, Florian MarkowetzBMC Bioinformatics|January 31, 2025
Flexible analysis of spatial transcriptomics data (FAST): a deconvolution approachMeng Zhang, Joel Parker, Lingling An, et al.BMC Bioinformatics|January 23, 2025
Joint embedding-classifier learning for interpretable collaborative filteringClémence Réda, Jill-Jênn Vie, Olaf WolkenhauerBMC Bioinformatics|January 24, 2025
BAC-browser: the tool for synthetic biologyTatiana A Semashko, Gleb Y Fisunov, Georgiy Y Shevelev, et al.BMC Bioinformatics|January 25, 2025
HDN-DDI: a novel framework for predicting drug-drug interactions using hierarchical molecular graphs and enhanced dual-view representation learningJinchen Sun, Haoran ZhengBMC Bioinformatics|January 20, 2025
Benchmarking cell type annotation methods for 10x Xenium spatial transcriptomics dataJinming Cheng, Xinyi Jin, Gordon K Smyth, et al.BMC Bioinformatics|January 17, 2025
MGATAF: multi-channel graph attention network with adaptive fusion for cancer-drug response predictionDhekra Saeed, Huanlai Xing, Barakat AlBadani, et al.BMC Bioinformatics|January 12, 2025
DTI-MHAPR: optimized drug-target interaction prediction via PCA-enhanced features and heterogeneous graph attention networksGuang Yang, Yinbo Liu, Sijian Wen, et al.BMC Bioinformatics|January 8, 2025
DFAST_QC: quality assessment and taxonomic identification tool for prokaryotic GenomesMohamed Elmanzalawi, Takatomo Fujisawa, Hiroshi Mori, et al.BMC Bioinformatics|January 8, 2025
CDPMF-DDA: contrastive deep probabilistic matrix factorization for drug-disease association predictionXianfang Tang, Yawen Hou, Yajie Meng, et al.Pageof 1,248