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Bioinformatics (Oxford, England)|April 25, 2025
TissueViewer: a web-based multiplexed image viewerDavid Gerardus Pieter van IJzendoorn, Magdalena Matusiak, Rob West, et al.
Bioinformatics (Oxford, England)|April 25, 2025
Popcorn: prediction of short coding and noncoding genomic sequences in prokaryotesAlison Kyrouz, Lian Liu, Lixin Qin, et al.
Bioinformatics (Oxford, England)|April 24, 2025
VSOT: volume-surface optimization for accurate ultrastructure analysis of dendritic spinesBoyu Lyu, Jiangxiong Wang, William Christopher Risher, et al.
Bioinformatics (Oxford, England)|April 16, 2025
Colora: a Snakemake workflow for complete chromosome-scale de novo genome assemblyLia Obinu, Timothy Booth, Heleen De Weerd, et al.
Bioinformatics (Oxford, England)|April 23, 2025
The signed two-space proximity model for learning representations in protein-protein interaction networksNikolaos Nakis, Chrysoula Kosma, Anastasia Brativnyk, et al.
Bioinformatics (Oxford, England)|April 24, 2025
m2ST: dual multi-scale graph clustering for spatially resolved transcriptomicsWei Zhang, Ziqi Zhang, Hailong Yang, et al.
Bioinformatics (Oxford, England)|April 15, 2025
GSLab: open-source platform for advanced phasor analysis in fluorescence microscopyAlexander Vallmitjana, Belén Torrado, Amanda F Durkin, et al.
Bioinformatics (Oxford, England)|April 15, 2025
ProtNote: a multimodal method for protein-function annotationSamir Char, Nathaniel Corley, Sarah Alamdari, et al.
Bioinformatics (Oxford, England)|April 15, 2025
A multi-view graph convolutional network framework based on adaptive adjacency matrix and multi-strategy fusion mechanism for identifying spatial domainsYuhan Fu, Mengdi Nan, Qing Ren, et al.
Bioinformatics (Oxford, England)|May 6, 2025
Foldclass and Merizo-search: scalable structural similarity search for single- and multi-domain proteins using geometric learningShaun M Kandathil, Andy M Lau, Daniel W A Buchan, et al.
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