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Bioinformatics Advances|September 8, 2025
A foundation model for learning genetic associations from brain imaging phenotypesDiego Machado Reyes, Myson Burch, Laxmi Parida, et al.
Bioinformatics Advances|February 16, 2026
InspectorORF: a tool for visualizing Ribo-Seq and additional genomic or transcriptomic dataEilidh L Ward, Isabel Birds, Mary J O'Connell, et al.
Bioinformatics Advances|February 16, 2026
Machine learning can distinguish orphans that have resulted from sequence divergence beyond recognitionEmilios Tassios, Jori de Leuw, Christoforos Nikolaou, et al.
Bioinformatics Advances|January 30, 2023
FUSTA: leveraging FUSE for manipulation of multiFASTA files at scaleFranklin Delehelle, Hugues Roest Crollius
Bioinformatics Advances|February 5, 2026
Shiny-Calorie: a context-aware application for indirect calorimetry data analysis and visualization using RStephan Grein, Tabea Elschner, Ronja Kardinal, et al.
Bioinformatics Advances|June 9, 2025
Identifying core genes in keloid and investigating immune infiltration and pan-cancer associations using eQTL and machine learningXiaoyuan He, Yang Song
Bioinformatics Advances|June 13, 2025
ReSort enhances reference-based cell type deconvolution for spatial transcriptomics through regional information integrationLinhua Wang, Ling Wu, Guantong Qi, et al.
Bioinformatics Advances|June 13, 2025
Poplar: a phylogenomics pipelineElizabeth Koning, Arjun Subedi, Raga Krishnakumar
Bioinformatics Advances|June 13, 2025
Causeway: a pipeline for genome-wide effector gene screening with Mendelian Randomization and colocalizationJulia A de Amorim, João Vitor F Cavalcante, Diego Marques-Coelho, et al.
Bioinformatics Advances|April 2, 2025
peptidy: a light-weight Python library for peptide representation in machine learningRıza Özçelik, Laura van Weesep, Sarah de Ruiter, et al.
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