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Genome Biology|March 29, 2025
SOAPy: a Python package to dissect spatial architecture, dynamics, and communicationHeqi Wang, Jiarong Li, Siyu Jing, et al.Genome Biology|March 30, 2025
Genotype inference from aggregated chromatin accessibility data reveals genetic regulatory mechanismsBrandon M Wenz, Yuan He, Nae-Chyun Chen, et al.Genome Biology|March 29, 2025
Pamoic acid and carbenoxolone specifically inhibit CRISPR/Cas9 in bacteria, mammalian cells, and mice in a DNA topology-specific mannerYuxuan Zhang, Wentao Zou, Yueyang Zhou, et al.Genome Biology|March 29, 2025
MACAW: a method for semi-automatic detection of errors in genome-scale metabolic modelsDevlin C Moyer, Justin Reimertz, Daniel Segrè, et al.Genome Biology|April 2, 2025
Integrative omics analysis reveals the genetic basis of fatty acid composition in Brassica napus seedsYuting Zhang, Yunhao Liu, Zhanxiang Zong, et al.Genome Biology|May 2, 2025
SlideCNA: spatial copy number alteration detection from Slide-seq-like spatial transcriptomics dataDiane Zhang, Åsa Segerstolpe, Michal Slyper, et al.Genome Biology|April 23, 2025
Variant effect predictor correlation with functional assays is reflective of clinical classification performanceBenjamin J Livesey, Joseph A MarshGenome Biology|April 15, 2025
Guidelines for releasing a variant effect predictorBenjamin J Livesey, Mihaly Badonyi, Mafalda Dias, et al.Genome Biology|April 16, 2025
Bayesian multi-study non-negative matrix factorization for mutational signaturesIsabella N Grabski, Lorenzo Trippa, Giovanni ParmigianiGenome Biology|March 27, 2025
Survey of gene, lncRNA and transposon transcription patterns in four mouse organs highlights shared and organ-specific sex-biased regulationQinwei Kim-Wee Zhuang, Klara Bauermeister, Jose Hector Galvez, et al.Pageof 642