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Nature Methods|November 17, 2025
A multi-omics molecular landscape of 30 tissues in aging female rhesus macaquesGong-Hua Li, Xiang-Qing Zhu, Fu-Hui Xiao, et al.Nature Methods|December 31, 2025
Pertpy: an end-to-end framework for perturbation analysisLukas Heumos, Yuge Ji, Lilly May, et al.Nature Methods|December 31, 2025
Bridging the dimensional gap from planar spatial transcriptomics to 3D cell atlasesSenlin Lin, Zhikang Wang, Yan Cui, et al.Nature Methods|December 30, 2025
Guidance for 3D traction force microscopy today and in the next decadeJorge Barrasa-Fano, Apeksha Shapeti, Alejandro Apolinar-Fernández, et al.Nature Methods|December 13, 2025
Computational strategies for cross-species knowledge transferHao Yuan, Christopher A Mancuso, Kayla Johnson, et al.Nature Methods|December 18, 2025
Selecting the optimal cell migration assay: fundamentals and practical guidelinesWenxuan Du, Praful R Nair, Andre Forjaz, et al.Nature Methods|November 7, 2025
nELISA: a high-throughput, high-plex platform enables quantitative profiling of the inflammatory secretomeMilad Dagher, Grant Ongo, Nathaniel Robichaud, et al.Nature Methods|November 11, 2025
Universal consensus 3D segmentation of cells from 2D segmented stacksFelix Y Zhou, Zach Marin, Clarence Yapp, et al.Nature Methods|October 31, 2025
High-resolution imaging mass cytometry to map subcellular structuresAlina Bollhagen, James Whipman, Ricardo Coelho, et al.Nature Methods|July 2, 2025
A transformer model for de novo sequencing of data-independent acquisition mass spectrometry dataJustin Sanders, Bo Wen, Paul A Rudnick, et al.Pageof 342